RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 CLUHP3Q96NS8 147 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 SHCBP1LQ9BZQ2 653 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 MID1IP1Q9NPA3 183 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 KCNJ16Q9NPI9 418 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 MIEF1Q9NQG6 463 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 RRAGDQ9NQL2 400 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-222ENST00000556768 QPCTLQ9NXS2 382 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 DLGAP4Q9Y2H0 992 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 WBP11Q9Y2W2 641 aaKnown RBP6.74□□□□□ -1.33
SCFD1-222ENST00000556768 CSMD1Q96PZ7 3565 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 SCN2AQ99250 2005 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 NUP210LQ5VU65 1888 aa6.74□□□□□ -1.33
SCFD1-222ENST00000556768 AQP7O14520 342 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 WDR1O75083 606 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 TRAPPC6AO75865 159 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 GLSO94925 669 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-222ENST00000556768 IGHG3P01860 377 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 ANXA4P09525 319 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-222ENST00000556768 CPA3P15088 417 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 ACVR2AP27037 513 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 GDF1P27539 372 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 ADORA2A-AS1P86434 159 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 BTKQ06187 659 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 PMPCAQ10713 525 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 FOXO1Q12778 655 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 ZYG11AQ6WRX3 759 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 B3GNT6Q6ZMB0 384 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 TRILQ7L0X0 811 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 HDXQ7Z353 690 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 OR5M9Q8NGP3 310 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 GTPBP3Q969Y2 492 aaKnown RBP6.73□□□□□ -1.33
SCFD1-222ENST00000556768 ERP27Q96DN0 273 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 HSPBAP1Q96EW2 488 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 LCORQ96JN0 433 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-222ENST00000556768 ZNF597Q96LX8 424 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 BBS4Q96RK4 519 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 TXLNGYQ9BZA5 131 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 METTL7AQ9H8H3 244 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 ACKR4Q9NPB9 350 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 TUBA8Q9NY65 449 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-222ENST00000556768 TAS2R9Q9NYW1 312 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 TIMM22Q9Y584 194 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 A0A1B0GTL3 188 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 A0A1B0GVC2 190 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 A0A1W2PPM1 405 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 PINLYPA6NC86 204 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 ZNHIT1O43257 154 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 ZNF354AO60765 605 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-222ENST00000556768 SNRPB2P08579 225 aaKnown RBP6.73□□□□□ -1.33
SCFD1-222ENST00000556768 IL3P08700 152 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 UROSP10746 265 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 ELAVL4P26378 380 aaKnown RBP6.73□□□□□ -1.33
SCFD1-222ENST00000556768 ABCD3P28288 659 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 TNFRSF8P28908 595 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 DNAJB13P59910 316 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 MRPS22P82650 360 aaKnown RBP6.73□□□□□ -1.33
SCFD1-222ENST00000556768 HMGCS1Q01581 520 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 PLCXD2Q0VAA5 305 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 PRICKLE4Q2TBC4 344 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 FAM209AQ5JX71 171 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 GALNT18Q6P9A2 607 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 NUP54Q7Z3B4 507 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 GSPT2Q8IYD1 628 aaKnown RBP6.73□□□□□ -1.33
SCFD1-222ENST00000556768 ZNF615Q8N8J6 731 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 ADCY4Q8NFM4 1077 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 CDC26Q8NHZ8 85 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 UCN3Q969E3 161 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 TMCO6Q96DC7 493 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 LRRC46Q96FV0 321 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 METTL2AQ96IZ6 378 aaKnown RBP6.73□□□□□ -1.33
SCFD1-222ENST00000556768 RILPQ96NA2 401 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 DMRTA2Q96SC8 542 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 TRMOQ9BU70 441 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 ACPTQ9BZG2 426 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 STMN4Q9H169 189 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-222ENST00000556768 L2HGDHQ9H9P8 463 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 OXSMQ9NWU1 459 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 EHD3Q9NZN3 535 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 ZNF225Q9UK10 706 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 CES1P1Q9UKY3 287 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 PCDHGB3Q9Y5G1 929 aa6.73□□□□□ -1.33
SCFD1-222ENST00000556768 CHCHD2Q9Y6H1 151 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-222ENST00000556768 ZGRF1Q86YA3 2104 aa6.72□□□□□ -1.33
SCFD1-222ENST00000556768 ABCA12Q86UK0 2595 aa6.72□□□□□ -1.33
SCFD1-222ENST00000556768 C15orf38-AP3S2A0A0A6YYH1 394 aa6.72□□□□□ -1.33
SCFD1-222ENST00000556768 A0A0G2JMM0 328 aa6.72□□□□□ -1.33
SCFD1-222ENST00000556768 A0A1W2PPB8 328 aa6.72□□□□□ -1.33
SCFD1-222ENST00000556768 A0A1W2PRS3 328 aa6.72□□□□□ -1.33
SCFD1-222ENST00000556768 KIR3DP1A8MWS1 328 aa6.72□□□□□ -1.33
SCFD1-222ENST00000556768 FOXO6A8MYZ6 492 aa6.72□□□□□ -1.33
SCFD1-222ENST00000556768 RGS14O43566 566 aa6.72□□□□□ -1.33
SCFD1-222ENST00000556768 SEC22BO75396 215 aa6.72□□□□□ -1.33
SCFD1-222ENST00000556768 NADKO95544 446 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-222ENST00000556768 CT62P0C5K7 136 aa6.72□□□□□ -1.33
SCFD1-222ENST00000556768 DDX5P17844 614 aaKnown RBP6.72□□□□□ -1.33
SCFD1-222ENST00000556768 DRD5P21918 477 aa6.72□□□□□ -1.33
SCFD1-222ENST00000556768 SSTR2P30874 369 aa6.72□□□□□ -1.33
SCFD1-222ENST00000556768 TIA1P31483 386 aaKnown RBP eCLIP6.72□□□□□ -1.334e-8■■□□□ 11.9
SCFD1-222ENST00000556768 PPICP45877 212 aa6.72□□□□□ -1.33
SCFD1-222ENST00000556768 FBXW4P57775 412 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms