RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 TRIM65Q6PJ69 517 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 Q6ZRP5 223 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 CBWD2Q8IUF1 395 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 ARFGAP2Q8N6H7 521 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 CHDHQ8NE62 594 aaPredicted RBP3.63□□□□□ -1.83
PRPF39-210ENST00000556718 N4BP2L2Q92802 583 aaPredicted RBP3.63□□□□□ -1.83
PRPF39-210ENST00000556718 ATXN7L3BQ96GX2 97 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 RBM18Q96H35 190 aaKnown RBP3.63□□□□□ -1.83
PRPF39-210ENST00000556718 CAPNS2Q96L46 248 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 NSMCE3Q96MG7 304 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 CPXM1Q96SM3 734 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 TBCDQ9BTW9 1192 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 APOOQ9BUR5 198 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 MRPL13Q9BYD1 178 aaKnown RBP3.63□□□□□ -1.83
PRPF39-210ENST00000556718 BARHL1Q9BZE3 327 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 LRRCC1Q9C099 1032 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 POLR1EQ9GZS1 481 aaKnown RBP3.63□□□□□ -1.83
PRPF39-210ENST00000556718 ALG9Q9H6U8 611 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 ZNF696Q9H7X3 374 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 Q9HAA7 133 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 LPAR2Q9HBW0 351 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 RDH8Q9NYR8 311 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 THYN1Q9P016 225 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 GHRLQ9UBU3 117 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 SEC14L4Q9UDX3 406 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 CIDEBQ9UHD4 219 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 XPO7Q9UIA9 1087 aaKnown RBP3.63□□□□□ -1.83
PRPF39-210ENST00000556718 NIP7Q9Y221 180 aaKnown RBP eCLIP3.63□□□□□ -1.83
PRPF39-210ENST00000556718 KLHDC2Q9Y2U9 406 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 PEG3Q9GZU2 1588 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 RAB3GAP2Q9H2M9 1393 aa3.63□□□□□ -1.83
PRPF39-210ENST00000556718 AKNAQ7Z591 1439 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 SYNJ2O15056 1496 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 COL2A1P02458 1487 aaPredicted RBP3.62□□□□□ -1.83
PRPF39-210ENST00000556718 IGLV7-46A0A075B6I9 117 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 IGHV3-20A0A0C4DH32 117 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 TTC26A0AVF1 554 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 BCLAF3A2AJT9 711 aaKnown RBP3.62□□□□□ -1.83
PRPF39-210ENST00000556718 IGLON5A6NGN9 336 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 RNF212BA8MTL3 300 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 ALOX15BO15296 676 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 EDIL3O43854 480 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 TBX19O60806 448 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 ECDO95905 644 aaPredicted RBP3.62□□□□□ -1.83
PRPF39-210ENST00000556718 IGHDP01880 384 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 TRIM49P0CI25 452 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 TRIM49CP0CI26 452 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 CYP11B1P15538 503 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 ZNF26P17031 533 aaPredicted RBP3.62□□□□□ -1.83
PRPF39-210ENST00000556718 PTPN4P29074 926 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 PPP2R1BP30154 601 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 MAT2AP31153 395 aaKnown RBP3.62□□□□□ -1.83
PRPF39-210ENST00000556718 OTX2P32243 289 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 DLSTP36957 453 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 HTR5AP47898 357 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 GBX2P52951 348 aaPredicted RBP3.62□□□□□ -1.83
PRPF39-210ENST00000556718 MRPS6P82932 125 aaKnown RBP3.62□□□□□ -1.83
PRPF39-210ENST00000556718 NAAAQ02083 359 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 TRDNQ13061 729 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 FASTKD3Q14CZ7 662 aaKnown RBP3.62□□□□□ -1.83
PRPF39-210ENST00000556718 ZKSCAN8Q15776 578 aaPredicted RBP3.62□□□□□ -1.83
PRPF39-210ENST00000556718 PDK4Q16654 411 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 TATDN3Q17R31 274 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 MS4A18Q3C1V0 323 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 MOGAT2Q3SYC2 334 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 MUC21Q5SSG8 566 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 NCR3LG1Q68D85 454 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 DMKNQ6E0U4 476 aaPredicted RBP3.62□□□□□ -1.83
PRPF39-210ENST00000556718 BLOC1S2Q6QNY1 142 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 CASC1Q6TDU7 716 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 CBLN3Q6UW01 205 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 ZFAND4Q86XD8 727 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 ZDHHC21Q8IVQ6 265 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 EFCAB13Q8IY85 973 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 SAMD12Q8N8I0 201 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 OR4F5Q8NH21 305 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 SLC25A36Q96CQ1 311 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 ELMO2Q96JJ3 720 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 TTC25Q96NG3 672 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 RCHY1Q96PM5 261 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 TRIM6Q9C030 488 aaPredicted RBP3.62□□□□□ -1.83
PRPF39-210ENST00000556718 RAB33BQ9H082 229 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 TMEM117Q9H0C3 514 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 NT5DC2Q9H857 520 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 RMND5AQ9H871 391 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 MOB1AQ9H8S9 216 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 NRN1Q9NPD7 142 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 IL1RAPQ9NPH3 570 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 DEPPQ9NTK1 212 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 C1orf123Q9NWV4 160 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 GPR83Q9NYM4 423 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 RAI14Q9P0K7 980 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 PURGQ9UJV8 347 aaKnown RBP3.62□□□□□ -1.83
PRPF39-210ENST00000556718 MGAT4AQ9UM21 535 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 EXOGQ9Y2C4 368 aaKnown RBP3.62□□□□□ -1.83
PRPF39-210ENST00000556718 AUP1Q9Y679 476 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 SF3B1O75533 1304 aaKnown RBP eCLIP3.62□□□□□ -1.83
PRPF39-210ENST00000556718 CARMIL1Q5VZK9 1371 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 MYH15Q9Y2K3 1946 aa3.62□□□□□ -1.83
PRPF39-210ENST00000556718 A0A0A6YYD4 124 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms