RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 A0A1W2PN81 502 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ARHGEF33A8MVX0 844 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 GRXCR1A8MXD5 290 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 NPIPB8E9PQR5 432 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 H3BSA7 217 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 K7ESM1 405 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 SLC22A1O15245 554 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ATXN7O15265 892 aaPredicted RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 EFSO43281 561 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 DYRK3O43781 588 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 POP7O75817 140 aaKnown RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 PAPLNO95428 1278 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ADH5P11766 374 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 BCKDHAP12694 445 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 PRPH2P23942 346 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 S100A7P31151 101 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 RORAP35398 523 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 CHRNA7P36544 502 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 GNPDA1P46926 289 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 CEBPGP53567 150 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 GPLD1P80108 840 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 TXNL4AP83876 142 aaKnown RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ZP2Q05996 745 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 SLC36A3Q495N2 470 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 GTDC1Q4AE62 458 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 HIKESHIQ53FT3 197 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 TBCELQ5QJ74 424 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 C18orf63Q68DL7 685 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 OGFOD3Q6PK18 319 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 KIAA1324Q6UXG2 1013 aaKnown RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 TMEM26Q6ZUK4 368 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 RBM23Q86U06 439 aaKnown RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 SULF2Q8IWU5 870 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 TRMT10AQ8TBZ6 339 aaKnown RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 C22orf15Q8WYQ4 148 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 CPNE4Q96A23 557 aaPredicted RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 RRNAD1Q96FB5 475 aaKnown RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 OR4K3Q96R72 315 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 PIMREGQ9BSJ6 248 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 NLNQ9BYT8 704 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 SLC29A3Q9BZD2 475 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ATG10Q9H0Y0 220 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ACTR8Q9H981 624 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 CARS2Q9HA77 564 aaKnown RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 LRTM1Q9HBL6 345 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 A4D1N5 150 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 TO15178 435 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 INPP4BO15327 924 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 TPST1O60507 370 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 XYLBO75191 536 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 WDPCPO95876 746 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 DLGAP3O95886 979 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 C1QCP02747 245 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 MT-ND1P03886 318 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 TFAP2AP05549 437 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 SRPRAP08240 638 aaKnown RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 HLA-EP13747 358 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 CD36P16671 472 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 CPEP16870 476 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 EN2P19622 333 aaPredicted RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 LAP3P28838 519 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 GPR4P46093 362 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 SLC6A11P48066 632 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 PREPP48147 710 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 PRLHRP49683 370 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 MECP2P51608 486 aaKnown RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 PWP1Q13610 501 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ETFDHQ16134 617 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 CYP51A1Q16850 503 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 HKDC1Q2TB90 917 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 RIPPLY2Q5TAB7 128 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ADNP2Q6IQ32 1131 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 PET117Q6UWS5 81 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 IL20RBQ6UXL0 311 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ARMC8Q8IUR7 673 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 METTL25Q8N6Q8 603 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 CELF5Q8N6W0 485 aaKnown RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 FAM86B1Q8N7N1 296 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 CD300LFQ8TDQ1 290 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ST8SIA4Q92187 359 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ELMO1Q92556 727 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 SNAPC3Q92966 411 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 GLYATL1Q969I3 302 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 APIPQ96GX9 242 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ZNF764Q96H86 408 aaPredicted RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 LRIG1Q96JA1 1093 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 SNX18Q96RF0 628 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 MRPS26Q9BYN8 205 aaKnown RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ALX4Q9H161 411 aaPredicted RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 HIPK2Q9H2X6 1198 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 CHODLQ9H9P2 273 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 C1orf109Q9NX04 203 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 PCDHB10Q9UN67 800 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 SLC5A10A0PJK1 596 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 MFSD2BA6NFX1 497 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 PDZK1P1A8MUH7 402 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 UPK1AO00322 258 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 SLC28A1O00337 649 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 SLC16A5O15375 505 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 AP2A2O94973 939 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms