RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 MBD3L2Q8NHZ7 208 aaPredicted RBP12.09□□□□□ -0.47
TGFB3-204ENST00000556285 IFT81Q8WYA0 676 aa12.09□□□□□ -0.47
TGFB3-204ENST00000556285 NINJ1Q92982 152 aa12.09□□□□□ -0.47
TGFB3-204ENST00000556285 RMND5BQ96G75 393 aaPredicted RBP12.09□□□□□ -0.47
TGFB3-204ENST00000556285 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
TGFB3-204ENST00000556285 MRPL57Q9BQC6 102 aaKnown RBP12.09□□□□□ -0.47
TGFB3-204ENST00000556285 G6PC3Q9BUM1 346 aa12.09□□□□□ -0.47
TGFB3-204ENST00000556285 OSBPL11Q9BXB4 747 aa12.09□□□□□ -0.47
TGFB3-204ENST00000556285 MRPL46Q9H2W6 279 aaKnown RBP12.09□□□□□ -0.47
TGFB3-204ENST00000556285 MTRF1LQ9UGC7 380 aaKnown RBP12.09□□□□□ -0.47
TGFB3-204ENST00000556285 FETUBQ9UGM5 382 aa12.09□□□□□ -0.47
TGFB3-204ENST00000556285 RPH3AQ9Y2J0 694 aaPredicted RBP12.09□□□□□ -0.47
TGFB3-204ENST00000556285 A0A1W2PPR1 153 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 PRAMEF25A6NGN4 478 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 B4DXG7 233 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 EEF1E1-BLOC1S5C9J1V9 151 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 EEF1E1O43324 174 aaKnown RBP12.08□□□□□ -0.48
TGFB3-204ENST00000556285 GUCY1B2O75343 617 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 URI1O94763 535 aaPredicted RBP12.08□□□□□ -0.48
TGFB3-204ENST00000556285 COL6A2P12110 1019 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 DRD5P21918 477 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 TCEA1P23193 301 aaKnown RBP12.08□□□□□ -0.48
TGFB3-204ENST00000556285 HTR6P50406 440 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 SERPINB9P50453 376 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 CORO7P57737 925 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 ADAM8P78325 824 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 RAE1P78406 368 aaKnown RBP12.08□□□□□ -0.48
TGFB3-204ENST00000556285 SRYQ05066 204 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 DAZAP2Q15038 168 aaPredicted RBP12.08□□□□□ -0.48
TGFB3-204ENST00000556285 UNC50Q53HI1 259 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 ZNF628Q5EBL2 1059 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 TEX35Q5T0J7 233 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 C10orf62Q5T681 223 aaPredicted RBP12.08□□□□□ -0.48
TGFB3-204ENST00000556285 SLC30A6Q6NXT4 461 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 TMEM81Q6P7N7 255 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 KRTAP1-3Q8IUG1 177 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 CCDC116Q8IYX3 515 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 GOT1L1Q8NHS2 421 aaPredicted RBP12.08□□□□□ -0.48
TGFB3-204ENST00000556285 KAT2AQ92830 837 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 TMBIM1Q969X1 311 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 C1QTNF3Q9BXJ4 246 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 CALHM2Q9HA72 323 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 BRF2Q9HAW0 419 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 KLRF1Q9NZS2 232 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 JKAMPQ9P055 326 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 TMEM216Q9P0N5 145 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 TRPS1Q9UHF7 1281 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 FBXL2Q9UKC9 423 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 SNX6Q9UNH7 406 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 EXO1Q9UQ84 846 aaKnown RBP12.08□□□□□ -0.48
TGFB3-204ENST00000556285 GPR55Q9Y2T6 319 aaPredicted RBP12.08□□□□□ -0.48
TGFB3-204ENST00000556285 HEATR5AQ86XA9 2040 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 PCNX3Q9H6A9 2034 aa12.08□□□□□ -0.48
TGFB3-204ENST00000556285 TUBAL3A6NHL2 446 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 ACOX3O15254 700 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 DLX3O60479 287 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 ACTL6AO96019 429 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 IL3P08700 152 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 TMIGD3P0DMS9 266 aaPredicted RBP12.07□□□□□ -0.48
TGFB3-204ENST00000556285 EPXP11678 715 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 CYP4B1P13584 511 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 CPN1P15169 458 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 GCAP28676 217 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 PPICP45877 212 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 HMGCS1Q01581 520 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 CLCQ05315 142 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 PRSS53Q2L4Q9 553 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 OR5M10Q6IEU7 315 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 NPSR1Q6W5P4 371 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 Q71RC1 249 aaPredicted RBP12.07□□□□□ -0.48
TGFB3-204ENST00000556285 TRIM42Q8IWZ5 723 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 PIP4P2Q8N4L2 257 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 MMGT1Q8N4V1 131 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 OR9A2Q8NGT5 310 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 OR14L1PQ8NHC6 308 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 ZPLD1Q8TCW7 415 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 ACPTQ9BZG2 426 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 OR2B2Q9GZK3 357 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 PFDN4Q9NQP4 134 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 VPS29Q9UBQ0 182 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 FOXD3Q9UJU5 478 aaPredicted RBP12.07□□□□□ -0.48
TGFB3-204ENST00000556285 ZNF180Q9UJW8 692 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 UTS2RQ9UKP6 389 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 CFL2Q9Y281 166 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 DLGAP4Q9Y2H0 992 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 ZNF780BQ9Y6R6 833 aa12.07□□□□□ -0.48
TGFB3-204ENST00000556285 FRG2CA6NGY1 282 aa12.06□□□□□ -0.48
TGFB3-204ENST00000556285 CLCA1A8K7I4 914 aa12.06□□□□□ -0.48
TGFB3-204ENST00000556285 H0Y3Z8 333 aa12.06□□□□□ -0.48
TGFB3-204ENST00000556285 TO15178 435 aa12.06□□□□□ -0.48
TGFB3-204ENST00000556285 TSPAN2O60636 221 aa12.06□□□□□ -0.48
TGFB3-204ENST00000556285 CDH16O75309 829 aa12.06□□□□□ -0.48
TGFB3-204ENST00000556285 REM1O75628 298 aa12.06□□□□□ -0.48
TGFB3-204ENST00000556285 CBR3O75828 277 aa12.06□□□□□ -0.48
TGFB3-204ENST00000556285 SUPT7LO94864 414 aa12.06□□□□□ -0.48
TGFB3-204ENST00000556285 ESRRBO95718 433 aa12.06□□□□□ -0.48
TGFB3-204ENST00000556285 RHOXF2BP0C7M4 288 aa12.06□□□□□ -0.48
TGFB3-204ENST00000556285 CT45A8P0DMV1 189 aa12.06□□□□□ -0.48
TGFB3-204ENST00000556285 CT45A9P0DMV2 189 aa12.06□□□□□ -0.48
TGFB3-204ENST00000556285 DNASE1P24855 282 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms