RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 OR2L13Q8N349 312 aa13.96□□□□□ -0.17
ACTN1-217ENST00000556203 TMEM251Q8N6I4 163 aa13.96□□□□□ -0.17
ACTN1-217ENST00000556203 OR7A2PQ8NGA2 310 aa13.96□□□□□ -0.17
ACTN1-217ENST00000556203 ZFP28Q8NHY6 868 aa13.96□□□□□ -0.17
ACTN1-217ENST00000556203 RAB3IL1Q8TBN0 382 aa13.96□□□□□ -0.17
ACTN1-217ENST00000556203 MTERF3Q96E29 417 aa13.96□□□□□ -0.17
ACTN1-217ENST00000556203 ZBED6CLQ96FA7 236 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-217ENST00000556203 ATP6V1G3Q96LB4 118 aa13.96□□□□□ -0.17
ACTN1-217ENST00000556203 JSRP1Q96MG2 331 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-217ENST00000556203 DOHHQ9BU89 302 aa13.96□□□□□ -0.17
ACTN1-217ENST00000556203 DEFB127Q9H1M4 99 aa13.96□□□□□ -0.17
ACTN1-217ENST00000556203 MANSC1Q9H8J5 431 aa13.96□□□□□ -0.17
ACTN1-217ENST00000556203 NOP53Q9NZM5 478 aaKnown RBP13.96□□□□□ -0.17
ACTN1-217ENST00000556203 ATP6V1HQ9UI12 483 aa13.96□□□□□ -0.17
ACTN1-217ENST00000556203 SH3BGRL2Q9UJC5 107 aa13.96□□□□□ -0.17
ACTN1-217ENST00000556203 C19orf53Q9UNZ5 99 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-217ENST00000556203 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.96□□□□□ -0.17
ACTN1-217ENST00000556203 UBR5O95071 2799 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-217ENST00000556203 A0A1B0GUH1 482 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 ZNHIT1O43257 154 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 SNNO75324 88 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-217ENST00000556203 CT45A8P0DMV1 189 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 CT45A9P0DMV2 189 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 EFNA1P20827 205 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-217ENST00000556203 FRKP42685 505 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-217ENST00000556203 MANFP55145 182 aaKnown RBP13.95□□□□□ -0.18
ACTN1-217ENST00000556203 CASP6P55212 293 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 RPP38P78345 283 aaKnown RBP13.95□□□□□ -0.18
ACTN1-217ENST00000556203 CT45A2Q5DJT8 189 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 TBCELQ5QJ74 424 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 DESI1Q6ICB0 168 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 FJX1Q86VR8 437 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 SPPL2CQ8IUH8 684 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 SLC34A3Q8N130 599 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 FAM109AQ8N4B1 249 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 KRTCAP2Q8N6L1 136 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 GOLGA6L1Q8N7Z2 621 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 HGDQ93099 445 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 TMBIM1Q969X1 311 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 SECISBP2Q96T21 854 aaKnown RBP13.95□□□□□ -0.18
ACTN1-217ENST00000556203 SH3GL2Q99962 352 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 VIPAS39Q9H9C1 493 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 ZFP64Q9NPA5 681 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 ACSS1Q9NUB1 689 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-217ENST00000556203 MARCOQ9UEW3 520 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-217ENST00000556203 BOKQ9UMX3 212 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-217ENST00000556203 ZNF835Q9Y2P0 537 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 MYO18BQ8IUG5 2567 aa13.95□□□□□ -0.18
ACTN1-217ENST00000556203 RP1L1Q8IWN7 2480 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-217ENST00000556203 A0A1B0GTH9 108 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 ANKRD33BA6NCL7 494 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 LRRC3CA6NJW4 275 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 UGT2B11O75310 529 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 REM1O75628 298 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 PSMG1O95456 288 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 LDLRP01130 860 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 IFI6P09912 130 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 KITP10721 976 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 LAMP1P11279 417 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 ABOP16442 354 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 PRPS1L1P21108 318 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 CASP3P42574 277 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 CA7P43166 264 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 MAGEA5P43359 124 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 CDK9P50750 372 aaKnown RBP13.94□□□□□ -0.18
ACTN1-217ENST00000556203 C3AR1Q16581 482 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 HYAL4Q2M3T9 481 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 SMU1Q2TAY7 513 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 CPTPQ5TA50 214 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 TENM4Q6N022 2769 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 NUP54Q7Z3B4 507 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 FGD2Q7Z6J4 655 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 SLC44A2Q8IWA5 706 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-217ENST00000556203 CHERPQ8IWX8 916 aaKnown RBP13.94□□□□□ -0.18
ACTN1-217ENST00000556203 NUDT8Q8WV74 236 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 RELTQ969Z4 430 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 RILPQ96NA2 401 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 NODALQ96S42 347 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 METTL7AQ9H8H3 244 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 ZDHHC11Q9H8X9 412 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 MEAF6Q9HAF1 191 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 ASIC5Q9NY37 505 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 TINAGQ9UJW2 476 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 OR10H1Q9Y4A9 318 aa13.94□□□□□ -0.18
ACTN1-217ENST00000556203 POLEQ07864 2286 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 SVILO95425 2214 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 TRIM3O75382 744 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-217ENST00000556203 SNX4O95219 450 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 CELA3AP09093 270 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 RFPL3SP0C7P2 107 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 LBPP18428 481 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 PRKAG1P54619 331 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 DIO3P55073 304 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 CLDN8P56748 225 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 PSPHP78330 225 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 PSG6Q00889 435 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 OCRLQ01968 901 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 TMEM198Q66K66 360 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 PAOXQ6QHF9 649 aa13.93□□□□□ -0.18
ACTN1-217ENST00000556203 Q6ZPB1 254 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms