RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 GALR3O60755 368 aaPredicted RBP10.19□□□□□ -0.78
ACTN1-216ENST00000556083 ACTL6BO94805 426 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 DIO3P55073 304 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 CRYZQ08257 329 aaKnown RBP10.19□□□□□ -0.78
ACTN1-216ENST00000556083 GPR176Q14439 515 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 EXOC3L2Q2M3D2 409 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 PXKQ7Z7A4 578 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 CLIP4Q8N3C7 705 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 ASB17Q8WXJ9 295 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 RAB8BQ92930 207 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 GCDHQ92947 438 aaPredicted RBP10.19□□□□□ -0.78
ACTN1-216ENST00000556083 TGM7Q96PF1 710 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 MYADMQ96S97 322 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 SGIP1Q9BQI5 828 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 CLSTN3Q9BQT9 956 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 MTG2Q9H4K7 406 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 XKR8Q9H6D3 395 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 CSNK1G1Q9HCP0 422 aa10.19□□□□□ -0.78
ACTN1-216ENST00000556083 C2orf92A0A1B0GVN3 265 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 OR5K3A6NET4 321 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 PTTG1O95997 202 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 ENTPD1P49961 510 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 CNN3Q15417 329 aaKnown RBP10.18□□□□□ -0.78
ACTN1-216ENST00000556083 NSDHLQ15738 373 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 MEP1AQ16819 746 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 EML3Q32P44 896 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 CRTC1Q6UUV9 634 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 XKR5Q6UX68 686 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 SNX29P2Q8IUI4 249 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 GALNT6Q8NCL4 622 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 OR4K3Q96R72 315 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 KLHL9Q9P2J3 617 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 GGT3PA6NGU5 568 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 FBP2O00757 339 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 LDB2O43679 373 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 ZNF28P17035 718 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 MYF6P23409 242 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 PHC1P78364 1004 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 GLO1Q04760 184 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 HNRNPA0Q13151 305 aaKnown RBP10.18□□□□□ -0.78
ACTN1-216ENST00000556083 MEF2DQ14814 521 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 NR0B2Q15466 257 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 MANEAQ5SRI9 462 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 FAM69AQ5T7M9 428 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 TMED4Q7Z7H5 227 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 TMEM151BQ8IW70 566 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 RNF113BQ8IZP6 322 aaKnown RBP10.18□□□□□ -0.78
ACTN1-216ENST00000556083 OR9I1Q8NGQ6 314 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 ADAMTS19Q8TE59 1207 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 SPRYD4Q8WW59 207 aaPredicted RBP10.18□□□□□ -0.78
ACTN1-216ENST00000556083 FUBP1Q96AE4 644 aaKnown RBP10.18□□□□□ -0.78
ACTN1-216ENST00000556083 CPNE5Q9HCH3 593 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 ACSS2Q9NR19 701 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 MED17Q9NVC6 651 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 SDHAF2Q9NX18 166 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 PTTG3PQ9NZH4 202 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 SARDHQ9UL12 918 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 EDARQ9UNE0 448 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 CH25HO95992 272 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 IFNA10P01566 189 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 MAGP20916 626 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 HOXA11P31270 313 aaPredicted RBP10.18□□□□□ -0.78
ACTN1-216ENST00000556083 RRADP55042 308 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 S100A12P80511 92 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 GGTA1PQ4G0N0 100 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 GSG1LQ6UXU4 331 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 ARL14Q8N4G2 192 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 OR9A2Q8NGT5 310 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 DIO2Q92813 273 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 GIMAP5Q96F15 307 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 APOOQ9BUR5 198 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 EPHX3Q9H6B9 360 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 PARPBPQ9NWS1 579 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 PRELID3BQ9Y3B1 194 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 CICQ96RK0 1608 aaPredicted RBP10.18□□□□□ -0.78
ACTN1-216ENST00000556083 GRXCR1A8MXD5 290 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 SEC14L5O43304 696 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 GPRIN2O60269 458 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 EGFP01133 1207 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 RAB3BP20337 219 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 PYCR1P32322 319 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 NUDT6P53370 316 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 IRF4Q15306 451 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 BCL2A1Q16548 175 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 COMMD6Q7Z4G1 85 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 ZNF366Q8N895 744 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 OR4K5Q8NGD3 323 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 OR14K1Q8NGZ2 314 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 GPR148Q8TDV2 347 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 TBC1D20Q96BZ9 403 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 SH3YL1Q96HL8 342 aaPredicted RBP10.18□□□□□ -0.78
ACTN1-216ENST00000556083 HYLS1Q96M11 299 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 F2RL3Q96RI0 385 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 WACQ9BTA9 647 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 ATG5Q9H1Y0 275 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 IL21RQ9HBE5 538 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 PSAT1Q9Y617 370 aa10.18□□□□□ -0.78
ACTN1-216ENST00000556083 FUOMA2VDF0 154 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 H3BNC9 293 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 H7C2Y5 167 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms