RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 PCDHGA8Q9Y5G5 932 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 CSNK1G3Q9Y6M4 447 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 C5orf42Q9H799 3197 aa7.78□□□□□ -1.16
ATXN3-235ENST00000556082 NUP214P35658 2090 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-235ENST00000556082 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 A0A1B0GTW7 788 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 ZNF701M0R085 212 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-235ENST00000556082 SYT5O00445 386 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 BCKDKO14874 412 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 CASC3O15234 703 aaKnown RBP7.77□□□□□ -1.17
ATXN3-235ENST00000556082 SLC28A2O43868 658 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 PLOD3O60568 738 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 PRKRAO75569 313 aaKnown RBP7.77□□□□□ -1.17
ATXN3-235ENST00000556082 DIRAS1O95057 198 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 GPR75O95800 540 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 CLIC3O95833 236 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 OPN1SWP03999 348 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 ATP1B1P05026 303 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 HMGN2P05204 90 aaKnown RBP7.77□□□□□ -1.17
ATXN3-235ENST00000556082 PROS1P07225 676 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 FESP07332 822 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 GUSBP08236 651 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 NR2F1P10589 423 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 CPMP14384 443 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 PVRP15151 417 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 ATP6V1B1P15313 513 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 PORP16435 677 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-235ENST00000556082 CRHBPP24387 322 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 PIGAP37287 484 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 FEN1P39748 380 aaKnown RBP7.77□□□□□ -1.17
ATXN3-235ENST00000556082 CAPZBP47756 277 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 SH3BGRP55822 239 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-235ENST00000556082 ESRRGP62508 458 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 SKP1P63208 163 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 DUSP2Q05923 314 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 CD47Q08722 323 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 PPP1R8Q12972 351 aaKnown RBP7.77□□□□□ -1.17
ATXN3-235ENST00000556082 GPR19Q15760 415 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 ZBED5Q49AG3 693 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 WDR45BQ5MNZ6 344 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 GARNL3Q5VVW2 1013 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 HEPHL1Q6MZM0 1159 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 ZNF773Q6PK81 442 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 FAM92BQ6ZTR7 304 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 MED25Q71SY5 747 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 OFCC1Q8IZS5 231 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 PARP8Q8N3A8 854 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 LINC00471Q8N535 108 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 C19orf47Q8N9M1 422 aaKnown RBP7.77□□□□□ -1.17
ATXN3-235ENST00000556082 TTC29Q8NA56 475 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-235ENST00000556082 ATG16L2Q8NAA4 619 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 CHDHQ8NE62 594 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-235ENST00000556082 NUP43Q8NFH3 380 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 GPR32P1Q8NGA4 272 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 ZNF675Q8TD23 568 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 LMX1AQ8TE12 382 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 XAGE5Q8WWM1 108 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 FKBP10Q96AY3 582 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 GIMAP5Q96F15 307 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 HRASLS5Q96KN8 279 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 CD180Q99467 661 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 APOL4Q9BPW4 351 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 NRSN2Q9GZP1 204 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 KRT84Q9NSB2 600 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 TRPC4Q9UBN4 977 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 BLOC1S6Q9UL45 172 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 C19orf53Q9UNZ5 99 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-235ENST00000556082 SH3GLB1Q9Y371 365 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 SIT1Q9Y3P8 196 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 DSPPQ9NZW4 1301 aa7.77□□□□□ -1.17
ATXN3-235ENST00000556082 PLXND1Q9Y4D7 1925 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 MYOCOSA0A1B0GUC4 107 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 SLC9B1P1A6NJY1 282 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 B4DGG1 531 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 FFAR1O14842 300 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 AQP9O43315 295 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 MITFO75030 526 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 SEC24DO94855 1032 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 OXSR1O95747 527 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 LGI1O95970 557 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 F13BP05160 661 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 EIF2S1P05198 315 aaKnown RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 ST6GAL1P15907 406 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 TYRP1P17643 537 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 NELFEP18615 380 aaKnown RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 CDH3P22223 829 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 CBLP22681 906 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 POLR2IP36954 125 aaKnown RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 MC3RP41968 323 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 OR1E2P47887 323 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 GABRA4P48169 554 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 CLK3P49761 638 aaKnown RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 AFF3P51826 1226 aaKnown RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 MAZP56270 477 aaKnown RBP7.76□□□□□ -1.17
ATXN3-235ENST00000556082 RAB38P57729 211 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 NUP107P57740 925 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 TEKQ02763 1124 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 NPRL3Q12980 569 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 CDK5R2Q13319 367 aa7.76□□□□□ -1.17
ATXN3-235ENST00000556082 FAM53BQ14153 422 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms