RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	TMEM107	Q6UX40	140 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	SHISA6	Q6ZSJ9	500 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	ATCAY	Q86WG3	371 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	CALHM3	Q86XJ0	350 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	VWA5B2	Q8N398	1253 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	ZNF615	Q8N8J6	731 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	NFAM1	Q8NET5	270 aa	Predicted RBP	10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	NUP43	Q8NFH3	380 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	OR7G2	Q8NG99	324 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	KAT2A	Q92830	837 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	GIMAP5	Q96F15	307 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	VPS50	Q96JG6	964 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	ART5	Q96L15	291 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	IP6K3	Q96PC2	410 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	CDRT15	Q96T59	188 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	WDR77	Q9BQA1	342 aa	Predicted RBP	10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	SLC35A5	Q9BS91	424 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	SPATA9	Q9BWV2	254 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	CADM1	Q9BY67	442 aa	Known RBP	10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	SPAG4	Q9NPE6	437 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	PNO1	Q9NRX1	252 aa	Known RBP	10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	GPATCH2	Q9NW75	528 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	CMTM6	Q9NX76	183 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	THUMPD1	Q9NXG2	353 aa	Known RBP	10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	GIN1	Q9NXP7	522 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	CD300A	Q9UGN4	299 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	TUBD1	Q9UJT1	453 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	POLH	Q9Y253	713 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	TP53TG5	Q9Y2B4	290 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	SNX8	Q9Y5X2	465 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	CLCA3P	Q9Y6N3	262 aa		10.52	□□□□□ -0.73
RAD51B-222	ENST00000555907	CACNA1D	Q01668	2161 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	RNF103-CHMP3	A0A140T963	221 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	MYOCOS	A0A1B0GUC4	107 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	CLEC18A	A5D8T8	446 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	OR6C76	A6NM76	312 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907		K7EM74	188 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	ASNA1	O43681	348 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	COQ9	O75208	318 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	CHI3L1	P36222	383 aa	Predicted RBP	10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	MAN2A2	P49641	1150 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	GZMM	P51124	257 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	RPS18	P62269	152 aa	Known RBP	10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	ZNF267	Q14586	743 aa	Predicted RBP	10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	RGN	Q15493	299 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	SPDYE7P	Q495Y7	208 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	SAMD4B	Q5PRF9	694 aa	Known RBP	10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	C6orf163	Q5TEZ5	329 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	KIRREL2	Q6UWL6	708 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	CLEC18B	Q6UXF7	455 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	BNC2	Q6ZN30	1099 aa	Predicted RBP	10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	LANCL3	Q6ZV70	420 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	NET1	Q7Z628	596 aa	Predicted RBP	10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	SERPINA11	Q86U17	422 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	CLEC18C	Q8NCF0	446 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	OR1N1	Q8NGS0	311 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	ZNF721	Q8TF20	911 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	MIB2	Q96AX9	1013 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	IMMP1L	Q96LU5	166 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	ZNF583	Q96ND8	569 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	LPAR4	Q99677	370 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	SLC39A3	Q9BRY0	314 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	THUMPD3	Q9BV44	507 aa	Known RBP	10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	ACTRT3	Q9BYD9	372 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	IKZF5	Q9H5V7	419 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	ZCCHC3	Q9NUD5	404 aa	Known RBP	10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	RYDEN	Q9NUL5	291 aa	Known RBP	10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	PRODH2	Q9UF12	536 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	CFL2	Q9Y281	166 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	L3MBTL1	Q9Y468	752 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	HS3ST3B1	Q9Y662	390 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	KCNMB2	Q9Y691	235 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	TNRC6A	Q8NDV7	1962 aa	Known RBP	10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	RELN	P78509	3460 aa		10.51	□□□□□ -0.73
RAD51B-222	ENST00000555907	SPTAN1	Q13813	2472 aa	Known RBP	10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	IGHV1-45	A0A0A0MS14	117 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	SAGE2P	A6NJ88	616 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	DUXA	A6NLW8	204 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	SOCS6	O14544	535 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	TNFRSF21	O75509	655 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	AGR2	O95994	175 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	CLPS	P04118	112 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	HMGN2	P05204	90 aa	Known RBP	10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	HSD17B1	P14061	328 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	MATN1	P21941	496 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	GNLY	P22749	145 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	PGM1	P36871	562 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	PRIM2	P49643	509 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	EMD	P50402	254 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	ANXA11	P50995	505 aa	Known RBP	10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	SLC7A2	P52569	658 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	SLC37A1	P57057	533 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	FOXL2	P58012	376 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	MRPS35	P82673	323 aa	Known RBP	10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	RBBP4	Q09028	425 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	DUSP8	Q13202	625 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	SELPLG	Q14242	412 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	EXT1	Q16394	746 aa		10.5	□□□□□ -0.73
RAD51B-222	ENST00000555907	FXN	Q16595	210 aa		10.5	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms