RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 DAB2P98082 770 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 PRDX1Q06830 199 aaKnown RBP6.59□□□□□ -1.35
TDP1-213ENST00000555880 HNRNPA0Q13151 305 aaKnown RBP6.59□□□□□ -1.35
TDP1-213ENST00000555880 DUSP6Q16828 381 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 TMEM240Q5SV17 173 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 C22orf42Q6IC83 251 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 XKRXQ6PP77 449 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 HSDL2Q6YN16 418 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 BCDIN3DQ7Z5W3 292 aaKnown RBP6.59□□□□□ -1.35
TDP1-213ENST00000555880 UBE3DQ7Z6J8 389 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 ZER1Q7Z7L7 766 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 UBQLNLQ8IYU4 475 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 C7orf61Q8IZ16 206 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 OR6T1Q8NGN1 323 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 PIGXQ8TBF5 258 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 GNPDA2Q8TDQ7 276 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 ASB15Q8WXK1 588 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 C1GALT1C1Q96EU7 318 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 RNFT2Q96EX2 444 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 DIRAS2Q96HU8 199 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 C12orf66Q96MD2 445 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 SLC6A18Q96N87 628 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 LRRC3BQ96PB8 259 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 WDR26Q9H7D7 661 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 ANKRA2Q9H9E1 313 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 NEK6Q9HC98 313 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 ISYNA1Q9NPH2 558 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 TM7SF3Q9NS93 570 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 DDX28Q9NUL7 540 aaKnown RBP6.59□□□□□ -1.35
TDP1-213ENST00000555880 IMP3Q9NV31 184 aaKnown RBP6.59□□□□□ -1.35
TDP1-213ENST00000555880 TXNL4BQ9NX01 149 aaKnown RBP6.59□□□□□ -1.35
TDP1-213ENST00000555880 KLHL28Q9NXS3 571 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 CALML5Q9NZT1 146 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 FBXW2Q9UKT8 454 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 TBC1D24Q9ULP9 559 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 SNX7Q9UNH6 387 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 A0A1W2PPV9 198 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 A0A1W2PQ09 198 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 FABP12A6NFH5 140 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 IGLON5A6NGN9 336 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 GLOD5A6NK44 160 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 FAM170BA6NMN3 283 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 WWP2O00308 870 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 SYT5O00445 386 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 ERI3O43414 337 aaKnown RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 UBXN7O94888 489 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 TP53P04637 393 aaPredicted RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 ALPPP05187 535 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 HMGN2P05204 90 aaKnown RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 ACP5P13686 325 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 GABRA5P31644 462 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 SDC2P34741 201 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 MPIP34949 423 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 OPRD1P41143 372 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 NR4A2P43354 598 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 HTR3AP46098 478 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 NKX2-5P52952 324 aaPredicted RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 MRPS15P82914 257 aaKnown RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 CDK5Q00535 292 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 BNC1Q01954 994 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 TGM3Q08188 693 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 MESP2Q0VG99 397 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 SLAMF1Q13291 335 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 ASAH1Q13510 395 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 GPR50Q13585 617 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 DOC2BQ14184 412 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 LASP1Q14847 261 aaKnown RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 TRAM2Q15035 370 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 GPR19Q15760 415 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 PLK5Q496M5 336 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 ZFP69Q49AA0 526 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 MINDY4Q4G0A6 757 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 CRTC2Q53ET0 693 aaPredicted RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 C4orf48Q5BLP8 95 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 ZNF311Q5JNZ3 666 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 PAQR6Q6TCH4 344 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 ZNF730Q6ZMV8 503 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 SPATC1Q76KD6 591 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 C16orf62Q7Z3J2 963 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 CACTIN-AS1Q8N1I8 211 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 GDPD1Q8N9F7 314 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 LINC01555Q8NAE3 123 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 MORN4Q8NDC4 146 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 SRFBP1Q8NEF9 429 aaKnown RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 CREB3L4Q8TEY5 395 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 HERVK_113Q902F9 699 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 SLC9A6Q92581 669 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 OSTF1Q92882 214 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 TMEM203Q969S6 136 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 ZFYVE19Q96K21 471 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 YIPF4Q9BSR8 244 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 MED18Q9BUE0 208 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 MENTQ9BUN1 341 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 LGR4Q9BXB1 951 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 SRRQ9GZT4 340 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 RERGLQ9H628 205 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 ABCB9Q9NP78 766 aa6.58□□□□□ -1.36
TDP1-213ENST00000555880 MRPS30Q9NP92 439 aaKnown RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 FGF20Q9NP95 211 aaPredicted RBP6.58□□□□□ -1.36
TDP1-213ENST00000555880 KRCC1Q9NPI7 259 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms