RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 PTGR1Q14914 329 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 SMU1Q2TAY7 513 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 C4orf17Q53FE4 359 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 CPTPQ5TA50 214 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 LYPD8Q6UX82 237 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 SIAH3Q8IW03 269 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 DYDC1Q8WWB3 177 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 CIDECQ96AQ7 238 aaPredicted RBP11.14□□□□□ -0.63
SRP54-206ENST00000555317 ARL8AQ96BM9 186 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 OMA1Q96E52 524 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 ZNF597Q96LX8 424 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 BTBD9Q96Q07 612 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 SECISBP2Q96T21 854 aaKnown RBP11.14□□□□□ -0.63
SRP54-206ENST00000555317 DOHHQ9BU89 302 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 TTTY12Q9BZ98 90 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 NUF2Q9BZD4 464 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 METTL7AQ9H8H3 244 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 MANSC1Q9H8J5 431 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 VIPAS39Q9H9C1 493 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 ANKRA2Q9H9E1 313 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 IL1RL2Q9HB29 575 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 FOLH1BQ9HBA9 442 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 DEPPQ9NTK1 212 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 SUCOQ9UBS9 1254 aaKnown RBP11.14□□□□□ -0.63
SRP54-206ENST00000555317 SH3BGRL2Q9UJC5 107 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 MAPRE3Q9UPY8 281 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 CHCHD2Q9Y6H1 151 aaPredicted RBP11.14□□□□□ -0.63
SRP54-206ENST00000555317 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.14□□□□□ -0.63
SRP54-206ENST00000555317 ICE1Q9Y2F5 2266 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 TRPC5OSA6NMA1 111 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 HMGB1P1B2RPK0 211 aaPredicted RBP11.13□□□□□ -0.63
SRP54-206ENST00000555317 SLCO1B7G3V0H7 640 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 PLOD2O00469 737 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 LRRTM2O43300 516 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 SLC19A2O60779 497 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 SEMA7AO75326 666 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 REM1O75628 298 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 KITP10721 976 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 H2AFXP16104 143 aaPredicted RBP11.13□□□□□ -0.63
SRP54-206ENST00000555317 NAGAP17050 411 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 EMX2Q04743 252 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 DUSP8Q13202 625 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 PDE7AQ13946 482 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 PRSS53Q2L4Q9 553 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 RNFT1Q5M7Z0 435 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 C1QL3Q5VWW1 255 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 TMEM198Q66K66 360 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 ZNF551Q7Z340 670 aaPredicted RBP11.13□□□□□ -0.63
SRP54-206ENST00000555317 PACS2Q86VP3 889 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 SLC44A2Q8IWA5 706 aaPredicted RBP11.13□□□□□ -0.63
SRP54-206ENST00000555317 FAM109AQ8N4B1 249 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 NATD1Q8N6N6 113 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 SIMC1Q8NDZ2 872 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 SSC4DQ8WTU2 575 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 ELP4Q96EB1 424 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 VSTM2LQ96N03 204 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 COL21A1Q96P44 957 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 C20orf27Q9GZN8 174 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 EXO5Q9H790 373 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 AKTIPQ9H8T0 292 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 C3orf14Q9HBI5 128 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 SH2D2AQ9NP31 389 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 ACSS1Q9NUB1 689 aaPredicted RBP11.13□□□□□ -0.63
SRP54-206ENST00000555317 PNPOQ9NVS9 261 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 TUBA8Q9NY65 449 aaPredicted RBP11.13□□□□□ -0.63
SRP54-206ENST00000555317 KLRF1Q9NZS2 232 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 MARCOQ9UEW3 520 aaPredicted RBP11.13□□□□□ -0.63
SRP54-206ENST00000555317 HAO1Q9UJM8 370 aa11.13□□□□□ -0.63
SRP54-206ENST00000555317 MRTO4Q9UKD2 239 aaKnown RBP11.13□□□□□ -0.63
SRP54-206ENST00000555317 C19orf53Q9UNZ5 99 aaPredicted RBP11.13□□□□□ -0.63
SRP54-206ENST00000555317 EXO1Q9UQ84 846 aaKnown RBP11.13□□□□□ -0.63
SRP54-206ENST00000555317 GPR55Q9Y2T6 319 aaPredicted RBP11.13□□□□□ -0.63
SRP54-206ENST00000555317 NUP214P35658 2090 aaPredicted RBP11.12□□□□□ -0.63
SRP54-206ENST00000555317 PINLYPA6NC86 204 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 TTC36A6NLP5 189 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 PRRG2O14669 202 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 TO15178 435 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 SNNO75324 88 aaPredicted RBP11.12□□□□□ -0.63
SRP54-206ENST00000555317 PDE9AO76083 593 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 SNX4O95219 450 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 ABCB1P08183 1280 aaPredicted RBP11.12□□□□□ -0.63
SRP54-206ENST00000555317 STSP08842 583 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 IFI6P09912 130 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 G6PDP11413 515 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 ESRRAP11474 423 aaPredicted RBP11.12□□□□□ -0.63
SRP54-206ENST00000555317 LBPP18428 481 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 PRKAG1P54619 331 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 CORO7P57737 925 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 PRR5P85299 388 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 EFR3AQ14156 821 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 LSM12Q3MHD2 195 aaKnown RBP11.12□□□□□ -0.63
SRP54-206ENST00000555317 SPDYE7PQ495Y7 208 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 VPS26BQ4G0F5 336 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 ZNF385BQ569K4 471 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 MTFR2Q6P444 385 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 ARHGAP11AQ6P4F7 1023 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 LARP4Q71RC2 724 aaKnown RBP eCLIP11.12□□□□□ -0.63
SRP54-206ENST00000555317 NUP54Q7Z3B4 507 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 FJX1Q86VR8 437 aa11.12□□□□□ -0.63
SRP54-206ENST00000555317 EID3Q8N140 333 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms