RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 GSNP06396 782 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 FOLR1P15328 257 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 ACADLP28330 430 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 CDKN2CP42773 168 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 TMBIM6P55061 237 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 CXCR4P61073 352 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 MVKQ03426 396 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 ZNF630Q2M218 657 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-216ENST00000554975 HKDC1Q2TB90 917 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 METRNLQ641Q3 311 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 DUS1LQ6P1R4 473 aaKnown RBP10.44□□□□□ -0.74
SHMT2-216ENST00000554975 DHRS4L2Q6PKH6 230 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 COMMD6Q7Z4G1 85 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 CLVS1Q8IUQ0 354 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-216ENST00000554975 RBM12BQ8IXT5 1001 aaKnown RBP10.44□□□□□ -0.74
SHMT2-216ENST00000554975 SVOPQ8N4V2 548 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 TBC1D19Q8N5T2 526 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 FAM86B1Q8N7N1 296 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 PIK3C3Q8NEB9 887 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 ZFP90Q8TF47 636 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 RAB2BQ8WUD1 216 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 KLHL6Q8WZ60 621 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 SMPDL3AQ92484 453 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 ISOC1Q96CN7 298 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 HSH2DQ96JZ2 352 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 LURAP1Q96LR2 239 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 INSM2Q96T92 566 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-216ENST00000554975 DOK1Q99704 481 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 SMAD5Q99717 465 aaKnown RBP10.44□□□□□ -0.74
SHMT2-216ENST00000554975 BARD1Q99728 777 aaKnown RBP10.44□□□□□ -0.74
SHMT2-216ENST00000554975 NPLQ9BXD5 320 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-216ENST00000554975 GPR87Q9BY21 358 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 OR52A5Q9H2C5 316 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 UCK1Q9HA47 277 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 MIEF1Q9NQG6 463 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 FAM118AQ9NWS6 357 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 FAF1Q9UNN5 650 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-216ENST00000554975 FARSAQ9Y285 508 aaKnown RBP10.44□□□□□ -0.74
SHMT2-216ENST00000554975 PADI2Q9Y2J8 665 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 TPRKBQ9Y3C4 175 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 ANKHD1Q8IWZ3 2542 aaKnown RBP10.44□□□□□ -0.74
SHMT2-216ENST00000554975 IGHV5-51A0A0C4DH38 117 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 LOC100130705A0A1B0GUX0 176 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 C1orf226A1L170 272 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 PDE9AO76083 593 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 ANXA11P50995 505 aaKnown RBP10.43□□□□□ -0.74
SHMT2-216ENST00000554975 CSNK2BP67870 215 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 RAE1P78406 368 aaKnown RBP10.43□□□□□ -0.74
SHMT2-216ENST00000554975 REEP5Q00765 189 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 TEKQ02763 1124 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 TAP2Q03519 686 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 DCTN2Q13561 401 aaKnown RBP10.43□□□□□ -0.74
SHMT2-216ENST00000554975 TSTA3Q13630 321 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-216ENST00000554975 NKG7Q16617 165 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 ZNF691Q5VV52 312 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 KLHL35Q6PF15 583 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 TMIGD1Q6UXZ0 262 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 PRSS42Q7Z5A4 293 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 CROCCP3Q8IVE0 287 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 LILRA3Q8N6C8 439 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-216ENST00000554975 EGLN2Q96KS0 407 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 MUS81Q96NY9 551 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 CHST8Q9H2A9 424 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 RHBGQ9H310 441 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 CXorf21Q9HAI6 301 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 THUMPD1Q9NXG2 353 aaKnown RBP10.43□□□□□ -0.74
SHMT2-216ENST00000554975 SCN3BQ9NY72 215 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 GPR83Q9NYM4 423 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 SH3BP4Q9P0V3 963 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 ADAM29Q9UKF5 820 aa10.43□□□□□ -0.74
SHMT2-216ENST00000554975 SAMHD1Q9Y3Z3 626 aaKnown RBP10.43□□□□□ -0.74
SHMT2-216ENST00000554975 NIPBLQ6KC79 2804 aaeCLIP10.42□□□□□ -0.74
SHMT2-216ENST00000554975 ANKDD1BA6NHY2 528 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 TOX3O15405 576 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-216ENST00000554975 JRKO75564 520 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 LAMP1P11279 417 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 NPPBP16860 134 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 NELFEP18615 380 aaKnown RBP10.42□□□□□ -0.74
SHMT2-216ENST00000554975 CRHBPP24387 322 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 PDHA2P29803 388 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 CAPZBP47756 277 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 CCR8P51685 355 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 ARFIP1P53367 373 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 CDH15P55291 814 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 RPS15P62841 145 aaKnown RBP10.42□□□□□ -0.74
SHMT2-216ENST00000554975 TRA2BP62995 288 aaKnown RBP10.42□□□□□ -0.74
SHMT2-216ENST00000554975 RAB39AQ14964 217 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 RGNQ15493 299 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 IFI44LQ53G44 452 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 C6orf141Q5SZD1 244 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 PRAMEF17Q5VTA0 474 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 FAM71E1Q6IPT2 247 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 ARMC6Q6NXE6 501 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 TBPL2Q6SJ96 375 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 ISLR2Q6UXK2 745 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 KCTD8Q6ZWB6 473 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 CCDC80Q76M96 950 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 NUDT13Q86X67 352 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 PTOV1Q86YD1 416 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 LRRC56Q8IYG6 542 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms