RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 BTBD9Q96Q07 612 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 NODALQ96S42 347 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 AGPAT4Q9NRZ5 378 aa11.36□□□□□ -0.59
SYNE2-214ENST00000554928 INTS9Q9NV88 658 aaKnown RBP11.36□□□□□ -0.59
SYNE2-214ENST00000554928 DDX18Q9NVP1 670 aaKnown RBP11.36□□□□□ -0.59
SYNE2-214ENST00000554928 NOP53Q9NZM5 478 aaKnown RBP11.36□□□□□ -0.59
SYNE2-214ENST00000554928 CROCCQ5TZA2 2017 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 A0A087WV62 115 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 GXYLT2A0PJZ3 443 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 FRG2CA6NGY1 282 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 LRRC3CA6NJW4 275 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 C17orf51A8MQB3 221 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 FAM166BA8MTA8 275 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 HS6ST1O60243 411 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 UGT2B11O75310 529 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 SEMA7AO75326 666 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 ERN1O75460 977 aaKnown RBP11.35□□□□□ -0.59
SYNE2-214ENST00000554928 UNC5CO95185 931 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 C6orf47O95873 294 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 C1QCP02747 245 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 ABCB1P08183 1280 aaPredicted RBP11.35□□□□□ -0.59
SYNE2-214ENST00000554928 CELA3AP09093 270 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 EDN3P14138 238 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 CNR1P21554 472 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 DRD5P21918 477 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 MANFP55145 182 aaKnown RBP11.35□□□□□ -0.59
SYNE2-214ENST00000554928 C21orf58P58505 322 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 UFM1P61960 85 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 ALDH6A1Q02252 535 aaKnown RBP11.35□□□□□ -0.59
SYNE2-214ENST00000554928 PLCXD2Q0VAA5 305 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 SMU1Q2TAY7 513 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 CPTPQ5TA50 214 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 OGFOD2Q6N063 350 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 SLC44A2Q8IWA5 706 aaPredicted RBP11.35□□□□□ -0.59
SYNE2-214ENST00000554928 HOMEZQ8IX15 550 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 CLEC4FQ8N1N0 589 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 ZFP62Q8NB50 900 aaPredicted RBP11.35□□□□□ -0.59
SYNE2-214ENST00000554928 GOLM1Q8NBJ4 401 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 C17orf47Q8NEP4 570 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 OR52N2Q8NGI0 321 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 DNAJB8Q8NHS0 232 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 PIWIL2Q8TC59 973 aaKnown RBP11.35□□□□□ -0.59
SYNE2-214ENST00000554928 SPPL2AQ8TCT8 520 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 TMBIM1Q969X1 311 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 ERP27Q96DN0 273 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 THOC1Q96FV9 657 aaKnown RBP11.35□□□□□ -0.59
SYNE2-214ENST00000554928 C16orf58Q96GQ5 468 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 MAELQ96JY0 434 aaKnown RBP11.35□□□□□ -0.59
SYNE2-214ENST00000554928 SGCZQ96LD1 299 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 C7orf26Q96N11 449 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 CXorf36Q9H7Y0 433 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 EQTNQ9NQ60 294 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 SACM1LQ9NTJ5 587 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 ACSS1Q9NUB1 689 aaPredicted RBP11.35□□□□□ -0.59
SYNE2-214ENST00000554928 AIG1Q9NVV5 245 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 FLRT3Q9NZU0 649 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 PRODH2Q9UF12 536 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 LIPGQ9Y5X9 500 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 USH1CQ9Y6N9 552 aa11.35□□□□□ -0.59
SYNE2-214ENST00000554928 A0A1W2PRB8 838 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 CLEC18AA5D8T8 446 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 KLRC4-KLRK1H3BQV0 150 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 TO15178 435 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 TSPAN2O60636 221 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 SCN2BO60939 215 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 PPM1BO75688 479 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 GLSO94925 669 aaPredicted RBP11.34□□□□□ -0.59
SYNE2-214ENST00000554928 CRYABP02511 175 aaKnown RBP11.34□□□□□ -0.59
SYNE2-214ENST00000554928 P04436 131 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 RFPL3SP0C7P2 107 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 ACP2P11117 423 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 ZNF24P17028 368 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 PRPS1L1P21108 318 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 GPC1P35052 558 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 PTGDSP41222 190 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 PRKAG1P54619 331 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 MAD2L1Q13257 205 aaPredicted RBP11.34□□□□□ -0.59
SYNE2-214ENST00000554928 GAB1Q13480 694 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 RPS6KA2Q15349 733 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 PGS1Q32NB8 556 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 CMPK2Q5EBM0 449 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 SLC22A10Q63ZE4 541 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 NXNQ6DKJ4 435 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 CLEC18BQ6UXF7 455 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 R3HCC1LQ7Z5L2 792 aaKnown RBP11.34□□□□□ -0.59
SYNE2-214ENST00000554928 GALNT10Q86SR1 603 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 SLC34A3Q8N130 599 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 FBXW8Q8N3Y1 598 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 CLEC18CQ8NCF0 446 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 PRR7Q8TB68 274 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 DYDC1Q8WWB3 177 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 PIK3R3Q92569 461 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 EFHD2Q96C19 240 aaPredicted RBP11.34□□□□□ -0.59
SYNE2-214ENST00000554928 NTNG2Q96CW9 530 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 FAM120BQ96EK7 910 aaKnown RBP11.34□□□□□ -0.59
SYNE2-214ENST00000554928 ZBED6CLQ96FA7 236 aaPredicted RBP11.34□□□□□ -0.59
SYNE2-214ENST00000554928 GPR137Q96N19 417 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 EBF4Q9BQW3 602 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 YIPF4Q9BSR8 244 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 DUSP26Q9BV47 211 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms