RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 HPS4Q9NQG7 708 aa4.17□□□□□ -1.74
CHD8-207ENST00000554384 ZNF446Q9NWS9 450 aa4.17□□□□□ -1.74
CHD8-207ENST00000554384 THYN1Q9P016 225 aa4.17□□□□□ -1.74
CHD8-207ENST00000554384 VPS54Q9P1Q0 977 aa4.17□□□□□ -1.74
CHD8-207ENST00000554384 ERVK-18Q9QC07 812 aa4.17□□□□□ -1.74
CHD8-207ENST00000554384 CTSZQ9UBR2 303 aa4.17□□□□□ -1.74
CHD8-207ENST00000554384 SLC6A5Q9Y345 797 aa4.17□□□□□ -1.74
CHD8-207ENST00000554384 SNED1Q8TER0 1413 aa4.17□□□□□ -1.74
CHD8-207ENST00000554384 CRYBG1Q9Y4K1 1723 aa4.17□□□□□ -1.74
CHD8-207ENST00000554384 CUL9Q8IWT3 2517 aa4.17□□□□□ -1.74
CHD8-207ENST00000554384 ANKARQ7Z5J8 1434 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 YTHDC2Q9H6S0 1430 aaKnown RBP4.16□□□□□ -1.74
CHD8-207ENST00000554384 STAM2O75886 525 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 CXCL10P02778 98 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 CCDC192P0DO97 292 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 MBL2P11226 248 aaPredicted RBP4.16□□□□□ -1.74
CHD8-207ENST00000554384 NPY2RP49146 381 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 ZNF131P52739 623 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 ATXN3P54252 364 aaPredicted RBP4.16□□□□□ -1.74
CHD8-207ENST00000554384 RAG2P55895 527 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 SRPXP78539 464 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 ZNF528Q3MIS6 628 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 CCDC40Q4G0X9 1142 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 CCDC92Q53HC0 331 aaPredicted RBP4.16□□□□□ -1.74
CHD8-207ENST00000554384 MUC21Q5SSG8 566 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 WDR25Q64LD2 544 aaPredicted RBP4.16□□□□□ -1.74
CHD8-207ENST00000554384 SLC22A16Q86VW1 577 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 ZSCAN30Q86W11 494 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 Q8N377 158 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 ZNF781Q8N8C0 355 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 MAPK1IP1LQ8NDC0 245 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 TMEM45BQ96B21 275 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 CAPNS2Q96L46 248 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 NSMCE2Q96MF7 247 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 DCTN5Q9BTE1 182 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 EGLN1Q9GZT9 426 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 HSD3B7Q9H2F3 369 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 MOB1AQ9H8S9 216 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 PAK5Q9P286 719 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 IL20RAQ9UHF4 553 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.16□□□□□ -1.74
CHD8-207ENST00000554384 PIN4Q9Y237 131 aaKnown RBP4.16□□□□□ -1.74
CHD8-207ENST00000554384 FER1L5A0AVI2 2057 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 ZMYM6O95789 1325 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 NHSQ6T4R5 1651 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 LMO7Q8WWI1 1683 aa4.16□□□□□ -1.74
CHD8-207ENST00000554384 A0A1B0GU03 582 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 ARHGAP42A6NI28 874 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 SHISA9B4DS77 424 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 NTN3O00634 580 aaPredicted RBP4.15□□□□□ -1.75
CHD8-207ENST00000554384 CHEK1O14757 476 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 CRLF1O75462 422 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 FRAT2O75474 233 aaPredicted RBP4.15□□□□□ -1.75
CHD8-207ENST00000554384 SEMA4FO95754 770 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 OAS1P00973 400 aaKnown RBP4.15□□□□□ -1.75
CHD8-207ENST00000554384 CCDC159P0C7I6 412 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 CAMLGP49069 296 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 POM121L1PQ3SYA9 428 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 GLIPR1L2Q4G1C9 344 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 AGKQ53H12 422 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 HIST2H2AA3Q6FI13 130 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 CDHR3Q6ZTQ4 885 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 NUFIP2Q7Z417 695 aaKnown RBP4.15□□□□□ -1.75
CHD8-207ENST00000554384 YRDCQ86U90 279 aaKnown RBP4.15□□□□□ -1.75
CHD8-207ENST00000554384 RNF130Q86XS8 419 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 LRRC17Q8N6Y2 441 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 LEMD2Q8NC56 503 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 OR4Q3Q8NH05 313 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 NPRL2Q8WTW4 380 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 PHYHIPQ92561 330 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 MRPL38Q96DV4 380 aaKnown RBP4.15□□□□□ -1.75
CHD8-207ENST00000554384 SAMD8Q96LT4 415 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 ANKRD27Q96NW4 1050 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 ACCSQ96QU6 501 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 ATOH8Q96SQ7 321 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 DCTPP1Q9H773 170 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 IL1RL2Q9HB29 575 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 ADGRL4Q9HBW9 690 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 SOHLH2Q9NX45 425 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 CNOT2Q9NZN8 540 aaKnown RBP4.15□□□□□ -1.75
CHD8-207ENST00000554384 EIF3KQ9UBQ5 218 aaKnown RBP4.15□□□□□ -1.75
CHD8-207ENST00000554384 CCPG1Q9ULG6 757 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 ENTPD4Q9Y227 616 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 MOB4Q9Y3A3 225 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 STYXL1Q9Y6J8 313 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 TUBGCP6Q96RT7 1819 aa4.15□□□□□ -1.75
CHD8-207ENST00000554384 BTAF1O14981 1849 aa4.14□□□□□ -1.75
CHD8-207ENST00000554384 SPATA31E1Q6ZUB1 1445 aa4.14□□□□□ -1.75
CHD8-207ENST00000554384 TNRC6CQ9HCJ0 1690 aaKnown RBP4.14□□□□□ -1.75
CHD8-207ENST00000554384 RNF103-CHMP3A0A140T963 221 aa4.14□□□□□ -1.75
CHD8-207ENST00000554384 PRPSAP2O60256 369 aa4.14□□□□□ -1.75
CHD8-207ENST00000554384 TSPAN2O60636 221 aa4.14□□□□□ -1.75
CHD8-207ENST00000554384 CGAP01215 116 aa4.14□□□□□ -1.75
CHD8-207ENST00000554384 FCER2P06734 321 aa4.14□□□□□ -1.75
CHD8-207ENST00000554384 HCKP08631 526 aa4.14□□□□□ -1.75
CHD8-207ENST00000554384 SERPINF2P08697 491 aa4.14□□□□□ -1.75
CHD8-207ENST00000554384 HIST1H2AGP0C0S8 130 aaPredicted RBP4.14□□□□□ -1.75
CHD8-207ENST00000554384 CAPN2P17655 700 aa4.14□□□□□ -1.75
CHD8-207ENST00000554384 PPP2R1AP30153 589 aa4.14□□□□□ -1.75
CHD8-207ENST00000554384 MAT2AP31153 395 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms