RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ANKRD33BA6NCL7 494 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 FAM166BA8MTA8 275 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 PRRG2O14669 202 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 TP53I11O14683 189 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 ACOX3O15254 700 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 ZG16O60844 167 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 SLITRK5O94991 958 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 FGF4P08620 206 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 PCSK2P16519 638 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 SLC1A6P48664 564 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 DNASE1L1P49184 302 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 DCAF7P61962 342 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 KCNJ2P63252 427 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 PSPHP78330 225 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 RPP38P78345 283 aaKnown RBP12.02□□□□□ -0.49
SHMT2-211ENST00000554310 MRPS35P82673 323 aaKnown RBP12.02□□□□□ -0.49
SHMT2-211ENST00000554310 FOXO1Q12778 655 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 DUSP8Q13202 625 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 EXOSC7Q15024 291 aaKnown RBP12.02□□□□□ -0.49
SHMT2-211ENST00000554310 ARL13AQ5H913 290 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-211ENST00000554310 FAM71E1Q6IPT2 247 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 FAM180BQ6P0A1 224 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 PAOXQ6QHF9 649 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 ASRGL1Q7L266 308 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 FGD2Q7Z6J4 655 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 CCDC116Q8IYX3 515 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 EID3Q8N140 333 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 ADCY4Q8NFM4 1077 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 OR52R1Q8NGF1 315 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 OR52N2Q8NGI0 321 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 OR9A2Q8NGT5 310 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 TWIST2Q8WVJ9 160 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 ZNF764Q96H86 408 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-211ENST00000554310 CCDC120Q96HB5 630 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 FCRL1Q96LA6 429 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 ITPAQ9BY32 194 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 C20orf27Q9GZN8 174 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 NXF5Q9H1B4 397 aaKnown RBP12.02□□□□□ -0.49
SHMT2-211ENST00000554310 TUBA8Q9NY65 449 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-211ENST00000554310 TAS2R7Q9NYW3 318 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 CNOT11Q9UKZ1 510 aaKnown RBP12.02□□□□□ -0.49
SHMT2-211ENST00000554310 DTX4Q9Y2E6 619 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 TMED5Q9Y3A6 229 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 FIS1Q9Y3D6 152 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 NPFFR2Q9Y5X5 522 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 PTGDR2Q9Y5Y4 395 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 NCOA6Q14686 2063 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-211ENST00000554310 A0A1B0GTH9 108 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 CYSRT1A8MQ03 144 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 MYO1GB0I1T2 1018 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 CDC40O60508 579 aaKnown RBP eCLIP12.01□□□□□ -0.49
SHMT2-211ENST00000554310 SEC22BO75396 215 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 CLDN1O95832 211 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 NAGAP17050 411 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 ABCD3P28288 659 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 NTSP30990 170 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 MPIP34949 423 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 PTGS2P35354 604 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 SOX18P35713 384 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 PIGAP37287 484 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 ABCE1P61221 599 aaKnown RBP12.01□□□□□ -0.49
SHMT2-211ENST00000554310 C2orf80Q0P641 193 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 KIAA0040Q15053 153 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 TRMT12Q53H54 448 aaKnown RBP12.01□□□□□ -0.49
SHMT2-211ENST00000554310 SH2D4BQ5SQS7 431 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 PRAMEF20Q5VT98 475 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 ZCCHC23Q6ZST2 131 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 MTDHQ86UE4 582 aaKnown RBP12.01□□□□□ -0.49
SHMT2-211ENST00000554310 TICAM1Q8IUC6 712 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 WDR75Q8IWA0 830 aaKnown RBP12.01□□□□□ -0.49
SHMT2-211ENST00000554310 CLYBLQ8N0X4 340 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 TMEM251Q8N6I4 163 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 OR2T11Q8NH01 316 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 FAM57AQ8TBR7 257 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 PIWIL2Q8TC59 973 aaKnown RBP12.01□□□□□ -0.49
SHMT2-211ENST00000554310 DIO2Q92813 273 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 HSPBAP1Q96EW2 488 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 LCORQ96JN0 433 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-211ENST00000554310 BBS4Q96RK4 519 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 TUBB1Q9H4B7 451 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 ZNF703Q9H7S9 590 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-211ENST00000554310 B4GALT7Q9UBV7 327 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 TRAF6Q9Y4K3 522 aa12.01□□□□□ -0.49
SHMT2-211ENST00000554310 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.01□□□□□ -0.49
SHMT2-211ENST00000554310 FRG2CA6NGY1 282 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 LRRC3CA6NJW4 275 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 TMEM233B4DJY2 109 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 LSM1O15116 133 aaKnown RBP12□□□□□ -0.49
SHMT2-211ENST00000554310 TO15178 435 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 ITM2AO43736 263 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 PLOD3O60568 738 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 COQ9O75208 318 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 PPM1BO75688 479 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 IGHG3P01860 377 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 LINC00032P0C843 101 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 ESRRAP11474 423 aaPredicted RBP12□□□□□ -0.49
SHMT2-211ENST00000554310 NQO1P15559 274 aaKnown RBP12□□□□□ -0.49
SHMT2-211ENST00000554310 DRD5P21918 477 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 PPICP45877 212 aa12□□□□□ -0.49
SHMT2-211ENST00000554310 EMDP50402 254 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms