RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 EIF4HQ15056 248 aaKnown RBP8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 TBCEQ15813 527 aaPredicted RBP8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 SPDYE7PQ495Y7 208 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 FBXO43Q4G163 708 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 TOR1AIP1Q5JTV8 583 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 C9orf50Q5SZB4 431 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 FIP1L1Q6UN15 594 aaKnown RBP8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 VITQ6UXI7 678 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 TSEN54Q7Z6J9 526 aaKnown RBP8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 ADGRG3Q86Y34 549 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 PM20D2Q8IYS1 436 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 SLC34A3Q8N130 599 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 CXorf40AQ8TE69 158 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 FBLIM1Q8WUP2 373 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 SUSD6Q92537 303 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 PPP1R16AQ96I34 528 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 COX14Q96I36 57 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 EFCAB11Q9BUY7 163 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 PLA2G2FQ9BZM2 168 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 REEP4Q9H6H4 257 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 RANBP3Q9H6Z4 567 aaPredicted RBP8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 SIRT5Q9NXA8 310 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 MALT1Q9UDY8 824 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 ADAM30Q9UKF2 790 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 ACSL5Q9ULC5 683 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 GPR34Q9UPC5 381 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 CMAHPQ9Y471 501 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 FOXE1O00358 373 aaPredicted RBP8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 SSX5O60225 188 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 TRIM3O75382 744 aaPredicted RBP8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 HMGN1P05114 100 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 FURINP09958 794 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 RRASP10301 218 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 PRKAR1AP10644 381 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 ETFAP13804 333 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 TNFRSF1BP20333 461 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 DRD3P35462 400 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 RPS19P39019 145 aaKnown RBP8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 TAS2R38P59533 333 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 TAS2R50P59544 299 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 BAMBIQ13145 260 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 LARS2Q15031 903 aaKnown RBP8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 LRFN4Q6PJG9 635 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 C17orf107Q6ZR85 190 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 LUZP2Q86TE4 346 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 SRFBP1Q8NEF9 429 aaKnown RBP8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 C16orf78Q8WTQ4 265 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 KLHL15Q96M94 604 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 DPEP2Q9H4A9 486 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 SERGEFQ9UGK8 458 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 DPP7Q9UHL4 492 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 DNAH14Q0VDD8 3507 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 KIF26AQ9ULI4 1882 aaPredicted RBP8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 A0A075B6Q4 140 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 F8W036 122 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 RNASET2O00584 256 aaKnown RBP8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 WBP4O75554 376 aaKnown RBP8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 OPN1SWP03999 348 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 ARSBP15848 533 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 MAOBP27338 520 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 GJA4P35212 333 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 SLC19A1P41440 591 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 CAPZA2P47755 286 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 SMSP52788 366 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 KCNJ10P78508 379 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 S100A12P80511 92 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 VEZF1Q14119 521 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 HSD17B12Q53GQ0 312 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 PRAMEF14Q5SWL7 426 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 ANXA8L1Q5VT79 327 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 PRAMEF13Q5VWM6 474 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 ANGPTL8Q6UXH0 198 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 FAM92BQ6ZTR7 304 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 GPALPP1Q8IXQ4 340 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 OR5AK3PQ8NH89 298 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 SLC9A6Q92581 669 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 PTP4A1Q93096 173 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 ZNF514Q96K75 400 aaPredicted RBP8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 C7orf34Q96L11 122 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 MED28Q9H204 178 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 MBNL1Q9NR56 388 aaKnown RBP8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 TAS2R16Q9NYV7 291 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 SPASTQ9UBP0 616 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 RPS6KA6Q9UK32 745 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 MAPRE3Q9UPY8 281 aa8.53□□□□□ -1.04
AL049839.2-201ENST00000553947 SMIM30A4D0T7 59 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 INMT-MINDY4F8WBC2 141 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 VEGFDO43915 354 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 GLAP06280 429 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 CDK1P06493 297 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 SLC2A2P11168 524 aaPredicted RBP8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 HOXB3P14651 431 aaPredicted RBP8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 PSMB5P28074 263 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 TRIM23P36406 574 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 CRATP43155 626 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 ST3GAL4Q11206 333 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 DUSP6Q16828 381 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 CLLU1Q5K131 121 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 KDM4DQ6B0I6 523 aa8.52□□□□□ -1.04
AL049839.2-201ENST00000553947 FAM71E1Q6IPT2 247 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms