RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ARIH2OSQ8N7S6 290 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 FADS6Q8N9I5 356 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 PDPRQ8NCN5 879 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 RNF214Q8ND24 703 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 ELOA3Q8NG57 546 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 OR7G1Q8NGA0 311 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 RDH11Q8TC12 318 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 NEUROG1Q92886 237 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 OMA1Q96E52 524 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 CMTM7Q96FZ5 175 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 SFXN2Q96NB2 322 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 TRAF4Q9BUZ4 470 aaPredicted RBP8.13□□□□□ -1.11
PRKCH-208ENST00000553846 ITPAQ9BY32 194 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 PLA2G12AQ9BZM1 189 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 DERL2Q9GZP9 239 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 DDX31Q9H8H2 851 aaKnown RBP8.13□□□□□ -1.11
PRKCH-208ENST00000553846 LRTM1Q9HBL6 345 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 PLSCR4Q9NRQ2 329 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 LPAR3Q9UBY5 353 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 LIPT1Q9Y234 373 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 TSC22D4Q9Y3Q8 395 aa8.13□□□□□ -1.11
PRKCH-208ENST00000553846 NCF1BA6NI72 391 aaPredicted RBP8.12□□□□□ -1.11
PRKCH-208ENST00000553846 NCF1CA8MVU1 366 aaPredicted RBP8.12□□□□□ -1.11
PRKCH-208ENST00000553846 CLGNO14967 610 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 ACOX3O15254 700 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 STK16O75716 305 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 CBX7O95931 251 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 NCF1P14598 390 aaPredicted RBP8.12□□□□□ -1.11
PRKCH-208ENST00000553846 PSMB1P20618 241 aaKnown RBP8.12□□□□□ -1.11
PRKCH-208ENST00000553846 IL11P20809 199 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 IGFBP5P24593 272 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 SERPINB1P30740 379 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 SLC6A8P48029 635 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 CLDN20P56880 219 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 CHIT1Q13231 466 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 LAPTM5Q13571 262 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 FRG1Q14331 258 aaKnown RBP8.12□□□□□ -1.11
PRKCH-208ENST00000553846 OR4D1Q15615 310 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 PRICKLE4Q2TBC4 344 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 ZNF672Q499Z4 452 aaPredicted RBP8.12□□□□□ -1.11
PRKCH-208ENST00000553846 PAGE2BQ5JRK9 111 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 MEX3DQ86XN8 651 aaKnown RBP8.12□□□□□ -1.11
PRKCH-208ENST00000553846 TCAIMQ8N3R3 496 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 METTL25Q8N6Q8 603 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 HUS1BQ8NHY5 278 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 SMAP2Q8WU79 429 aaPredicted RBP8.12□□□□□ -1.11
PRKCH-208ENST00000553846 FBXW5Q969U6 566 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 REPS1Q96D71 796 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 TRMT61AQ96FX7 289 aaKnown RBP8.12□□□□□ -1.11
PRKCH-208ENST00000553846 SLC35A4Q96G79 324 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 TNFRSF13CQ96RJ3 184 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 KRT12Q99456 494 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 TRIM2Q9C040 744 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 KLHL4Q9C0H6 718 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 ACTR6Q9GZN1 396 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 LYARQ9NX58 379 aaKnown RBP8.12□□□□□ -1.11
PRKCH-208ENST00000553846 MAT2BQ9NZL9 334 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 EHD3Q9NZN3 535 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 CTNNAL1Q9UBT7 734 aa8.12□□□□□ -1.11
PRKCH-208ENST00000553846 FAM95CA0A1B0GW59 222 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 OR6C70A6NIJ9 312 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 SPRY1O43609 319 aaPredicted RBP8.11□□□□□ -1.11
PRKCH-208ENST00000553846 TSPAN2O60636 221 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 SS18L1O75177 396 aaPredicted RBP8.11□□□□□ -1.11
PRKCH-208ENST00000553846 FAM58BPP0C7Q3 252 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 CTAGE8P0CG41 777 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 IGHV4-31P0DP07 118 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 TLX1P31314 330 aaPredicted RBP8.11□□□□□ -1.11
PRKCH-208ENST00000553846 BUD31P41223 144 aaPredicted RBP8.11□□□□□ -1.11
PRKCH-208ENST00000553846 PIK3CBP42338 1070 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 CASP9P55211 416 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 IRF8Q02556 426 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 DUSP2Q05923 314 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 PLCXD2Q0VAA5 305 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 MAP4K2Q12851 820 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 PON3Q15166 354 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.11□□□□□ -1.11
PRKCH-208ENST00000553846 TMEM44Q2T9K0 475 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 NCMAPQ5T1S8 102 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 UBAP2Q5T6F2 1119 aaKnown RBP8.11□□□□□ -1.11
PRKCH-208ENST00000553846 HLA-DQA1Q5Y7H0 255 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 OR52E8Q6IFG1 317 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 SULT1C3Q6IMI6 304 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 C11orf71Q6IPW1 123 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 GRHL2Q6ISB3 625 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 MED27Q6P2C8 311 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 LRRC70Q7Z2Q7 622 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 P4HA3Q7Z4N8 544 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 GGNQ86UU5 652 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 WFDC8Q8IUA0 241 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 CTAGE4Q8IX94 777 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 PPIL6Q8IXY8 311 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 SNX31Q8N9S9 440 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 OR6K3Q8NGY3 331 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 UBTD2Q8WUN7 234 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 MAIP1Q8WWC4 291 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 RGMAQ96B86 450 aa8.11□□□□□ -1.11
PRKCH-208ENST00000553846 LCORQ96JN0 433 aaPredicted RBP8.11□□□□□ -1.11
PRKCH-208ENST00000553846 BAG1Q99933 345 aaPredicted RBP8.11□□□□□ -1.11
PRKCH-208ENST00000553846 NAT9Q9BTE0 207 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms