RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 NNATQ16517 81 aa12.37□□□□□ -0.43
PRPF39-204ENST00000553605 FAM174BQ3ZCQ3 159 aa12.37□□□□□ -0.43
PRPF39-204ENST00000553605 PDLIM3Q53GG5 364 aaPredicted RBP12.37□□□□□ -0.43
PRPF39-204ENST00000553605 OR5M10Q6IEU7 315 aa12.37□□□□□ -0.43
PRPF39-204ENST00000553605 FAM166AQ6J272 317 aa12.37□□□□□ -0.43
PRPF39-204ENST00000553605 FRA10AC1Q70Z53 315 aa12.37□□□□□ -0.43
PRPF39-204ENST00000553605 GALNT12Q8IXK2 581 aa12.37□□□□□ -0.43
PRPF39-204ENST00000553605 RFLNBQ8N5W9 214 aa12.37□□□□□ -0.43
PRPF39-204ENST00000553605 OR6K3Q8NGY3 331 aa12.37□□□□□ -0.43
PRPF39-204ENST00000553605 ZMYND19Q96E35 227 aaPredicted RBP12.37□□□□□ -0.43
PRPF39-204ENST00000553605 SIGLEC10Q96LC7 697 aa12.37□□□□□ -0.43
PRPF39-204ENST00000553605 ADAD1Q96M93 576 aaKnown RBP12.37□□□□□ -0.43
PRPF39-204ENST00000553605 OR51B5Q9H339 312 aa12.37□□□□□ -0.43
PRPF39-204ENST00000553605 DNAJC11Q9NVH1 559 aa12.37□□□□□ -0.43
PRPF39-204ENST00000553605 EMC9Q9Y3B6 208 aa12.37□□□□□ -0.43
PRPF39-204ENST00000553605 ALPK2Q86TB3 2170 aa12.37□□□□□ -0.43
PRPF39-204ENST00000553605 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.36□□□□□ -0.43
PRPF39-204ENST00000553605 NCF1BA6NI72 391 aaPredicted RBP12.36□□□□□ -0.43
PRPF39-204ENST00000553605 NCF1CA8MVU1 366 aaPredicted RBP12.36□□□□□ -0.43
PRPF39-204ENST00000553605 EFCAB8A8MWE9 144 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 PYGBP11216 843 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 NCF1P14598 390 aaPredicted RBP12.36□□□□□ -0.43
PRPF39-204ENST00000553605 CASP2P42575 452 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 GZMKP49863 264 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 LSM11P83369 360 aaKnown RBP eCLIP12.36□□□□□ -0.43
PRPF39-204ENST00000553605 ZNF844Q08AG5 666 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 PLCXD2Q0VAA5 305 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 CTU2Q2VPK5 515 aaKnown RBP12.36□□□□□ -0.43
PRPF39-204ENST00000553605 DEPDC1Q5TB30 811 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 KHDRBS2Q5VWX1 349 aaKnown RBP12.36□□□□□ -0.43
PRPF39-204ENST00000553605 FAM45BPQ6NSW5 357 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 BEND4Q6ZU67 534 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 DTX2Q86UW9 622 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 ZCCHC7Q8N3Z6 543 aaKnown RBP12.36□□□□□ -0.43
PRPF39-204ENST00000553605 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.36□□□□□ -0.43
PRPF39-204ENST00000553605 SNX31Q8N9S9 440 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 MCUQ8NE86 351 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 KBTBD8Q8NFY9 601 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 OR7G1Q8NGA0 311 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 FAM45AQ8TCE6 357 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 RGMAQ96B86 450 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 CMTM7Q96FZ5 175 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 MANSC1Q9H8J5 431 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 NGBQ9NPG2 151 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 MOCS1Q9NZB8 636 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 EHD3Q9NZN3 535 aa12.36□□□□□ -0.43
PRPF39-204ENST00000553605 A0A1W2PR48 441 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 A0A1W2PS29 197 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 TAPBPO15533 448 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 SEC14L5O43304 696 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 AQP8O94778 261 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 PCNAP12004 261 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 ZNF37AP17032 561 aaPredicted RBP12.35□□□□□ -0.43
PRPF39-204ENST00000553605 ITGA2P17301 1181 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 PSMB1P20618 241 aaKnown RBP12.35□□□□□ -0.43
PRPF39-204ENST00000553605 IL11P20809 199 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 USF1P22415 310 aaPredicted RBP12.35□□□□□ -0.43
PRPF39-204ENST00000553605 MAGEA3P43357 314 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 RAP1GDS1P52306 607 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 IRF8Q02556 426 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 TSNQ15631 228 aaKnown RBP12.35□□□□□ -0.43
PRPF39-204ENST00000553605 FBXO48Q5FWF7 155 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 CNTN4Q8IWV2 1026 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 DEPDC4Q8N2C3 294 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 NKAPQ8N5F7 415 aaKnown RBP12.35□□□□□ -0.43
PRPF39-204ENST00000553605 STEAP2Q8NFT2 490 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 PROX1Q92786 737 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 S100PBPQ96BU1 408 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 TMCO6Q96DC7 493 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 LCORQ96JN0 433 aaPredicted RBP12.35□□□□□ -0.43
PRPF39-204ENST00000553605 TMEM79Q9BSE2 394 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 TRIM2Q9C040 744 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 STMN4Q9H169 189 aaPredicted RBP12.35□□□□□ -0.43
PRPF39-204ENST00000553605 FAIMQ9NVQ4 179 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 CISD1Q9NZ45 108 aaKnown RBP12.35□□□□□ -0.43
PRPF39-204ENST00000553605 CTNNAL1Q9UBT7 734 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 CORO1CQ9ULV4 474 aaPredicted RBP12.35□□□□□ -0.43
PRPF39-204ENST00000553605 ZKSCAN5Q9Y2L8 839 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 ZNF337Q9Y3M9 751 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 ASB4Q9Y574 426 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 SNX8Q9Y5X2 465 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 MALRD1Q5VYJ5 2156 aa12.35□□□□□ -0.43
PRPF39-204ENST00000553605 LOC100289279A0A1B0GTE1 492 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 PLPP1O14494 284 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 ACOX3O15254 700 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 KIAA0513O60268 411 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 PLGP00747 810 aaPredicted RBP12.34□□□□□ -0.43
PRPF39-204ENST00000553605 NR2F6P10588 404 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 FCGR2AP12318 317 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 EPB42P16452 691 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 PTNP21246 168 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 DEKP35659 375 aaKnown RBP12.34□□□□□ -0.43
PRPF39-204ENST00000553605 GGT5P36269 586 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 CTBP2P56545 445 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 DSCR4P56555 118 aaPredicted RBP12.34□□□□□ -0.43
PRPF39-204ENST00000553605 RPS3AP61247 264 aaKnown RBP12.34□□□□□ -0.43
PRPF39-204ENST00000553605 IRX1P78414 480 aaPredicted RBP12.34□□□□□ -0.43
PRPF39-204ENST00000553605 CHIT1Q13231 466 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 CRYMQ14894 314 aa12.34□□□□□ -0.43
PRPF39-204ENST00000553605 TGFBIQ15582 683 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms