RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 FAM214AQ32MH5 1076 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 INAVAQ3KP66 663 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 ZIK1Q3SY52 487 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-221ENST00000553498 C18orf63Q68DL7 685 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 FRMPD2BQ6IN97 320 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 MFSD12Q6NUT3 480 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 DHRS4L2Q6PKH6 230 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 TMEM107Q6UX40 140 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 B3GNT6Q6ZMB0 384 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 CEP68Q76N32 757 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 GPR141Q7Z602 305 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 TSEN54Q7Z6J9 526 aaKnown RBP6.85□□□□□ -1.31
ATXN3-221ENST00000553498 TRIM73Q86UV7 250 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 SATL1Q86VE3 508 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 KMT5CQ86Y97 462 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 MCATQ8IVS2 390 aaKnown RBP6.85□□□□□ -1.31
ATXN3-221ENST00000553498 ZNF595Q8IYB9 648 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 TAGAPQ8N103 731 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 ARHGEF39Q8N4T4 335 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 DNAJC22Q8N4W6 341 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 CDRT4Q8N9R6 151 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 CHDHQ8NE62 594 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-221ENST00000553498 OR6C4Q8NGE1 309 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 OR9A2Q8NGT5 310 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 LMX1AQ8TE12 382 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 ADAMTS15Q8TE58 950 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 XAGE5Q8WWM1 108 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 WFDC12Q8WWY7 111 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 RLN3Q8WXF3 142 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 KLHL6Q8WZ60 621 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 MVB12AQ96EY5 273 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 HRASLS5Q96KN8 279 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 COL21A1Q96P44 957 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 MACROD1Q9BQ69 325 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 BCL7BQ9BQE9 202 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 RBM38Q9H0Z9 239 aaKnown RBP6.85□□□□□ -1.31
ATXN3-221ENST00000553498 PIGUQ9H490 435 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 ARMC7Q9H6L4 198 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 MTHFD2LQ9H903 347 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-221ENST00000553498 DUSP22Q9NRW4 184 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 ACER3Q9NUN7 267 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 VNN3Q9NY84 501 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 PTTG2Q9NZH5 202 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 TMEM9Q9P0T7 183 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 C5AR2Q9P296 337 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 SUSD2Q9UGT4 822 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 SLC13A4Q9UKG4 626 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 C19orf53Q9UNZ5 99 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-221ENST00000553498 KLHL20Q9Y2M5 609 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 SH3GLB1Q9Y371 365 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 SIT1Q9Y3P8 196 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 PCDHGB5Q9Y5G0 923 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 PCDHGA8Q9Y5G5 932 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 MAGED1Q9Y5V3 778 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-221ENST00000553498 SNX5Q9Y5X3 404 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 LAMA3Q16787 3333 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 TICRRQ7Z2Z1 1910 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 CDH23Q9H251 3354 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 DOCK8Q8NF50 2099 aa6.85□□□□□ -1.31
ATXN3-221ENST00000553498 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 LOC105369274A0A096LPK9 316 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 LOC102723532A0A0G2JNH3 316 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 FITM1A5D6W6 292 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 GLOD5A6NK44 160 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 H0YIG0 161 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 CLDN4O14493 209 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 BCAT2O15382 392 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-221ENST00000553498 TOX3O15405 576 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-221ENST00000553498 YKT6O15498 198 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 UGT2B17O75795 530 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 SEC24DO94855 1032 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-221ENST00000553498 ZBTB11O95625 1053 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-221ENST00000553498 LGI1O95970 557 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 OPN1SWP03999 348 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 ALPPP05187 535 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 H1F0P07305 194 aaKnown RBP6.84□□□□□ -1.31
ATXN3-221ENST00000553498 MSL3P1P0C860 447 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 RNH1P13489 461 aaKnown RBP6.84□□□□□ -1.31
ATXN3-221ENST00000553498 GNSP15586 552 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 GSTM3P21266 225 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 PRKACGP22612 351 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 PIGAP37287 484 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 MC3RP41968 323 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 AVPR1BP47901 424 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 LSSP48449 732 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 ARRB1P49407 418 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-221ENST00000553498 CDH12P55289 794 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 VSX2P58304 361 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-221ENST00000553498 IL5RAQ01344 420 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 ALDH6A1Q02252 535 aaKnown RBP6.84□□□□□ -1.31
ATXN3-221ENST00000553498 CD47Q08722 323 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 CDK5R2Q13319 367 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 C1orf61Q13536 156 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 RUNX2Q13950 521 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 PUM1Q14671 1186 aaKnown RBP eCLIP6.84□□□□□ -1.31
ATXN3-221ENST00000553498 GRM7Q14831 915 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 LASP1Q14847 261 aaKnown RBP6.84□□□□□ -1.31
ATXN3-221ENST00000553498 NR1D2Q14995 579 aa6.84□□□□□ -1.31
ATXN3-221ENST00000553498 LARS2Q15031 903 aaKnown RBP6.84□□□□□ -1.31
ATXN3-221ENST00000553498 CNPY1Q3B7I2 92 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms