RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 A0A0J9YVX5 310 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 A0A1B0GTH9 108 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 A0A1B0GU03 582 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 ANKRD30BLA7E2S9 258 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 H0YL77 283 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 ALOX15BO15296 676 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 SDC3O75056 442 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 GOT2P00505 430 aaKnown RBP4.1□□□□□ -1.75
SYNE2-210ENST00000553455 IGHV3-13P01766 116 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 CA3P07451 260 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 NCF1P14598 390 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-210ENST00000553455 DESP17661 470 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 PTMSP20962 102 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 ADRA1AP35348 466 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 MDH1P40925 334 aaKnown RBP4.1□□□□□ -1.75
SYNE2-210ENST00000553455 ACAA2P42765 397 aaKnown RBP4.1□□□□□ -1.75
SYNE2-210ENST00000553455 POU3F4P49335 361 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 CSRP3P50461 194 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 KRTAP10-9P60411 292 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 PPIAP62937 165 aaKnown RBP4.1□□□□□ -1.75
SYNE2-210ENST00000553455 MRPS6P82932 125 aaKnown RBP4.1□□□□□ -1.75
SYNE2-210ENST00000553455 MS4A2Q01362 244 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 SRYQ05066 204 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 ZNF33BQ06732 778 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 ZNF506Q5JVG8 444 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 LEMD1Q68G75 181 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 DMKNQ6E0U4 476 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-210ENST00000553455 STOX1Q6ZVD7 989 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 PRSS48Q7RTY5 328 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 ERASQ7Z444 233 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 LRRC49Q8IUZ0 686 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 ADIPOR1Q96A54 375 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 TSGA13Q96PP4 275 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 ATOH8Q96SQ7 321 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 FAM173AQ9BQD7 235 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 RBM24Q9BX46 236 aaKnown RBP4.1□□□□□ -1.75
SYNE2-210ENST00000553455 DPH5Q9H2P9 285 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 RWDD1Q9H446 243 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-210ENST00000553455 KAT8Q9H7Z6 458 aaKnown RBP4.1□□□□□ -1.75
SYNE2-210ENST00000553455 COQ10BQ9H8M1 238 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 ELL3Q9HB65 397 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-210ENST00000553455 RCOR3Q9P2K3 495 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-210ENST00000553455 ATP6V0A2Q9Y487 856 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 PARD3Q8TEW0 1356 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 GON4LQ3T8J9 2241 aa4.1□□□□□ -1.75
SYNE2-210ENST00000553455 A0A087WZY1 265 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 ACOD1A6NK06 481 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 E2F3O00716 465 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 GAS8-AS1O95177 125 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 VENTXO95231 258 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 IGSF6O95976 241 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 IGHV3-9P01782 118 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 HEXBP07686 556 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 WNT2P09544 360 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 HOXB7P09629 217 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 SLC35G4P0C7Q5 338 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 TSPAN8P19075 237 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 CYP2F1P24903 491 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 PPP2R1BP30154 601 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 MFAP2P55001 183 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 GSTO1P78417 241 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 C14orf28Q4W4Y0 310 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 PNCKQ6P2M8 343 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 APOOLQ6UXV4 268 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 TMUB2Q71RG4 321 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 P4HA3Q7Z4N8 544 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 NET1Q7Z628 596 aaPredicted RBP4.09□□□□□ -1.75
SYNE2-210ENST00000553455 CENPSQ8N2Z9 138 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 TESK2Q96S53 571 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 SOSTQ9BQB4 213 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 FICDQ9BVA6 458 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 TRIM6Q9C030 488 aaPredicted RBP4.09□□□□□ -1.75
SYNE2-210ENST00000553455 RNF41Q9H4P4 317 aaPredicted RBP4.09□□□□□ -1.75
SYNE2-210ENST00000553455 ESM1Q9NQ30 184 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 TRPV5Q9NQA5 729 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 CUX2O14529 1486 aa4.09□□□□□ -1.75
SYNE2-210ENST00000553455 A0A1B0GUL7 405 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 TTC26A0AVF1 554 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 SRRM5B3KS81 715 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 H3BTX0 84 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 CLDN3O15551 220 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 GUCA1CO95843 209 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 CGAP01215 116 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 MT-ND1P03886 318 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 KRT6BP04259 564 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 PTMAP06454 111 aaKnown RBP4.08□□□□□ -1.76
SYNE2-210ENST00000553455 ANXA4P09525 319 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-210ENST00000553455 HSD17B1P14061 328 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 PAICSP22234 425 aaKnown RBP4.08□□□□□ -1.76
SYNE2-210ENST00000553455 PTGFRP43088 359 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 HTR5AP47898 357 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 KRT6CP48668 564 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 TRPC1P48995 793 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 SLC7A2P52569 658 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 NOP14P78316 857 aaKnown RBP4.08□□□□□ -1.76
SYNE2-210ENST00000553455 EXOSC2Q13868 293 aaKnown RBP4.08□□□□□ -1.76
SYNE2-210ENST00000553455 LPAL2Q16609 132 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 CDKN3Q16667 212 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 NHLRC3Q5JS37 347 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 SLC39A4Q6P5W5 647 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms