RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 PRICKLE4Q2TBC4 344 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 EEF1A1P5Q5VTE0 462 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 LIPJQ5W064 366 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 AAGABQ6PD74 315 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 SCIMPQ6UWF3 145 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 PLCZ1Q86YW0 608 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 MAPK1IP1LQ8NDC0 245 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 WDR20Q8TBZ3 569 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 REPS1Q96D71 796 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 PGM2Q96G03 612 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 LCORQ96JN0 433 aaPredicted RBP8.21□□□□□ -1.1
SYNE2-209ENST00000553308 CPNE1Q99829 537 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 MAT2BQ9NZL9 334 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 TXNDC16Q9P2K2 825 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 BCAP29Q9UHQ4 241 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 DKKL1Q9UK85 242 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 PLLPQ9Y342 182 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 RNF11Q9Y3C5 154 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 HEATR5AQ86XA9 2040 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 TCRBV9S1A1TA0A576 114 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 RNF212BA8MTL3 300 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 CBX7O95931 251 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 CGAP01215 116 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 CRHP06850 196 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 KLK1P06870 262 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 LTA4HP09960 611 aaKnown RBP8.2□□□□□ -1.1
SYNE2-209ENST00000553308 PORP16435 677 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-209ENST00000553308 KCNJ5P48544 419 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 B3GALT5-AS1P59052 145 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 GPX6P59796 221 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 DUSP2Q05923 314 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 TNK1Q13470 666 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 SLMAPQ14BN4 828 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 LTB4RQ15722 352 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 PFKFB4Q16877 469 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 ANKRD34AQ69YU3 496 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 OR5M10Q6IEU7 315 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 OR2A2Q6IF42 318 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 FAM180BQ6P0A1 224 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 PLEKHM3Q6ZWE6 761 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 RAPH1Q70E73 1250 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 GOLGA7Q7Z5G4 137 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 TBC1D1Q86TI0 1168 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-209ENST00000553308 PHC2Q8IXK0 858 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 UBQLNLQ8IYU4 475 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 ADCY4Q8NFM4 1077 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 OR52R1Q8NGF1 315 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 FIG4Q92562 907 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 CDKL2Q92772 493 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 TMBIM1Q969X1 311 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 NXNL1Q96CM4 212 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 ZNF845Q96IR2 970 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-209ENST00000553308 MRPL1Q9BYD6 325 aaKnown RBP8.2□□□□□ -1.1
SYNE2-209ENST00000553308 NMRAL1Q9HBL8 299 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 ELOVL5Q9NYP7 299 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 ZNF639Q9UID6 485 aa8.2□□□□□ -1.1
SYNE2-209ENST00000553308 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.19□□□□□ -1.1
SYNE2-209ENST00000553308 FRG2CA6NGY1 282 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 FAM159BA6NKW6 160 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 EFCAB8A8MWE9 144 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 H0YC42 278 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 C16orf97H3BN30 126 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 FOXE1O00358 373 aaPredicted RBP8.19□□□□□ -1.1
SYNE2-209ENST00000553308 ACOX3O15254 700 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 ZIC3O60481 467 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 UGDHO60701 494 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 NME6O75414 186 aaPredicted RBP8.19□□□□□ -1.1
SYNE2-209ENST00000553308 ERAL1O75616 437 aaKnown RBP8.19□□□□□ -1.1
SYNE2-209ENST00000553308 REM1O75628 298 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 SEMA3DO95025 777 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 PLAUP00749 431 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 ATP1B1P05026 303 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 THBDP07204 575 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 GFAPP14136 432 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 PAX1P15863 534 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 PCSK2P16519 638 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 GRK2P25098 689 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 DPP4P27487 766 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 FEN1P39748 380 aaKnown RBP8.19□□□□□ -1.1
SYNE2-209ENST00000553308 EMDP50402 254 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 TPD52P55327 224 aaPredicted RBP8.19□□□□□ -1.1
SYNE2-209ENST00000553308 ATP5J2P56134 94 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 CLDN15P56746 228 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 MRPS35P82673 323 aaKnown RBP8.19□□□□□ -1.1
SYNE2-209ENST00000553308 IRF9Q00978 393 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 DMTNQ08495 405 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 MAP4K2Q12851 820 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 GTF2H2Q13888 395 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 TRMT12Q53H54 448 aaKnown RBP8.19□□□□□ -1.1
SYNE2-209ENST00000553308 SLC48A1Q6P1K1 146 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 GTF2H2CQ6P1K8 395 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 ZNF704Q6ZNC4 412 aaPredicted RBP8.19□□□□□ -1.1
SYNE2-209ENST00000553308 CHMP1BQ7LBR1 199 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 CTAGE3PQ8IX95 158 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 CENPLQ8N0S6 344 aaPredicted RBP8.19□□□□□ -1.1
SYNE2-209ENST00000553308 MEIOBQ8N635 442 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 ZNF610Q8N9Z0 462 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 L3MBTL4Q8NA19 623 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 PYROXD1Q8WU10 500 aa8.19□□□□□ -1.1
SYNE2-209ENST00000553308 TMEM171Q8WVE6 324 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms