RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 USE1Q9NZ43 259 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 NDUFAF4Q9P032 175 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 IFT80Q9P2H3 777 aaPredicted RBP11.84□□□□□ -0.51
CACNB3-223ENST00000552480 SATB2Q9UPW6 733 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 HCN4Q9Y3Q4 1203 aa11.84□□□□□ -0.51
CACNB3-223ENST00000552480 SYNDIG1LA6NDD5 238 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 OR2W5A6NFC9 320 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 PRAMEF25A6NGN4 478 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 EFCAB7A8K855 629 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 ADAMDEC1O15204 470 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 PRAMEF2O60811 474 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 NME6O75414 186 aaPredicted RBP11.83□□□□□ -0.52
CACNB3-223ENST00000552480 SCRG1O75711 98 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 DIRAS1O95057 198 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 NKX2-2O95096 273 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 IFNW1P05000 195 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 IFNA16P05015 189 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 ALPPP05187 535 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 RPSAP08865 295 aaKnown RBP11.83□□□□□ -0.52
CACNB3-223ENST00000552480 FGF5P12034 268 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 CD59P13987 128 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 FPR1P21462 350 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 CSTF2P33240 577 aaKnown RBP eCLIP11.83□□□□□ -0.52
CACNB3-223ENST00000552480 OR1E2P47887 323 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 PDX1P52945 283 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 IST1P53990 364 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 RHAGQ02094 409 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 FUT7Q11130 342 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 MED21Q13503 144 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 ZNF267Q14586 743 aaPredicted RBP11.83□□□□□ -0.52
CACNB3-223ENST00000552480 SF3A2Q15428 464 aaKnown RBP11.83□□□□□ -0.52
CACNB3-223ENST00000552480 ZNHIT3Q15649 155 aaPredicted RBP11.83□□□□□ -0.52
CACNB3-223ENST00000552480 DUSP7Q16829 419 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 MFSD4BQ5TF39 518 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 PWWP2BQ6NUJ5 590 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 FRRS1Q6ZNA5 592 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 COX15Q7KZN9 410 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 OLIG3Q7RTU3 272 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 TMEM179BQ7Z7N9 219 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 STK32CQ86UX6 486 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 PPP1R3BQ86XI6 285 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 AGBL5Q8NDL9 886 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 NRBF2Q96F24 287 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 ZNF300Q96RE9 604 aaPredicted RBP11.83□□□□□ -0.52
CACNB3-223ENST00000552480 NR1H4Q96RI1 486 aaPredicted RBP11.83□□□□□ -0.52
CACNB3-223ENST00000552480 RBM4BQ9BQ04 359 aaKnown RBP11.83□□□□□ -0.52
CACNB3-223ENST00000552480 LMF2Q9BU23 707 aaKnown RBP11.83□□□□□ -0.52
CACNB3-223ENST00000552480 RBM4Q9BWF3 364 aaKnown RBP11.83□□□□□ -0.52
CACNB3-223ENST00000552480 OSBPL10Q9BXB5 764 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 PINK1Q9BXM7 581 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 AMBRA1Q9C0C7 1298 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 TGIF2Q9GZN2 237 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 TRIM45Q9H8W5 580 aaPredicted RBP11.83□□□□□ -0.52
CACNB3-223ENST00000552480 REEP1Q9H902 201 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 FOLH1BQ9HBA9 442 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 OCIAD1Q9NX40 245 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 SMPD3Q9NY59 655 aaPredicted RBP11.83□□□□□ -0.52
CACNB3-223ENST00000552480 HEMK1Q9Y5R4 338 aaPredicted RBP11.83□□□□□ -0.52
CACNB3-223ENST00000552480 ENPP4Q9Y6X5 453 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 CUL9Q8IWT3 2517 aa11.83□□□□□ -0.52
CACNB3-223ENST00000552480 ZDBF2Q9HCK1 2354 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 IGLV3-12A0A075B6K2 115 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 TTC36A6NLP5 189 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 SYT5O00445 386 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 DLGAP1O14490 977 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 CDX4O14627 284 aaPredicted RBP11.82□□□□□ -0.52
CACNB3-223ENST00000552480 TIAF1O95411 115 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 ONECUT2O95948 504 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 ALPLP05186 524 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 PABPC4LP0CB38 370 aaKnown RBP11.82□□□□□ -0.52
CACNB3-223ENST00000552480 RORAP35398 523 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 EMDP50402 254 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 ARHGDIAP52565 204 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 POU6F2P78424 691 aaPredicted RBP11.82□□□□□ -0.52
CACNB3-223ENST00000552480 PPP2R2BQ00005 443 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 CHRNEQ04844 493 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 GK3PQ14409 553 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 IL11RAQ14626 422 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 MINDY4Q4G0A6 757 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 CYP27C1Q4G0S4 372 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 NHSL2Q5HYW2 709 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 DCST2Q5T1A1 773 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 OTUD3Q5T2D3 398 aaPredicted RBP11.82□□□□□ -0.52
CACNB3-223ENST00000552480 C6orf52Q5T4I8 152 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 MLIPQ5VWP3 458 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 DHRS4L2Q6PKH6 230 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 B3GNT8Q7Z7M8 397 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 NAXDQ8IW45 347 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 MARVELD2Q8N4S9 558 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 COX18Q8N8Q8 333 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 SUMF1Q8NBK3 374 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 OR7G1Q8NGA0 311 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 MAGEE2Q8TD90 523 aaPredicted RBP11.82□□□□□ -0.52
CACNB3-223ENST00000552480 GPR151Q8TDV0 419 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 ATOH1Q92858 354 aaPredicted RBP11.82□□□□□ -0.52
CACNB3-223ENST00000552480 TSLPQ969D9 159 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 CLIP3Q96DZ5 547 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 RDH12Q96NR8 316 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 PIP5K1AQ99755 562 aa11.82□□□□□ -0.52
CACNB3-223ENST00000552480 RSPO3Q9BXY4 272 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms