RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 SLC22A16Q86VW1 577 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 WDR75Q8IWA0 830 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 OR2L13Q8N349 312 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 KRTCAP2Q8N6L1 136 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 PIWIL2Q8TC59 973 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 VSTM2LQ96N03 204 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 BTBD9Q96Q07 612 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 DPY30Q9C005 99 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 BOKQ9UMX3 212 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 GPR55Q9Y2T6 319 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 CHCHD2Q9Y6H1 151 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 POLEQ07864 2286 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 ASH1LQ9NR48 2969 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 PRRC2CQ9Y520 2896 aaKnown RBP17■□□□□ 0.31
PRPF40B-216ENST00000552301 UPK1AO00322 258 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 SDHDO14521 159 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 AGFG2O95081 481 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 LAMP1P11279 417 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 EFNA1P20827 205 aaPredicted RBP17■□□□□ 0.31
PRPF40B-216ENST00000552301 IL12BP29460 328 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 PIGAP37287 484 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 CLDN8P56748 225 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 NXNQ6DKJ4 435 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 RGS9BPQ6ZS82 235 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 SLC44A2Q8IWA5 706 aaPredicted RBP17■□□□□ 0.31
PRPF40B-216ENST00000552301 GHDCQ8N2G8 530 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 FAM26EQ8N5C1 309 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 CEP70Q8NHQ1 597 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 SECISBP2Q96T21 854 aaKnown RBP17■□□□□ 0.31
PRPF40B-216ENST00000552301 DOHHQ9BU89 302 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 TTTY12Q9BZ98 90 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 METTL7AQ9H8H3 244 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 C3orf14Q9HBI5 128 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 SH2D2AQ9NP31 389 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 OSGIN2Q9Y236 505 aa17■□□□□ 0.31
PRPF40B-216ENST00000552301 SEC23IPQ9Y6Y8 1000 aaKnown RBP17■□□□□ 0.31
PRPF40B-216ENST00000552301 GOLGA8QA0A0J9YX86 632 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 A0A1W2PRB8 838 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 PINLYPA6NC86 204 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 GOLGA8OA6NCC3 632 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 FAM166BA8MTA8 275 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 GOLGA8NF8WBI6 632 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 TO15178 435 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 ASNA1O43681 348 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 HS6ST1O60243 411 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 CDC40O60508 579 aaKnown RBP eCLIP16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 ABCB7O75027 752 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 NME6O75414 186 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 REM1O75628 298 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 FRKP42685 505 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 MASP1P48740 699 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 CDK9P50750 372 aaKnown RBP16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 DIO3P55073 304 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 CASP6P55212 293 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 CORO7P57737 925 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 PPIAP62937 165 aaKnown RBP16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 PRR5P85299 388 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 PGS1Q32NB8 556 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 LSM12Q3MHD2 195 aaKnown RBP16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 RNFT1Q5M7Z0 435 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 OGFOD2Q6N063 350 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 BNC2Q6ZN30 1099 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 SIAH3Q8IW03 269 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 SPPL2AQ8TCT8 520 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 TMBIM1Q969X1 311 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 ZNF597Q96LX8 424 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 JSRP1Q96MG2 331 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 C7orf26Q96N11 449 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 DUSP26Q9BV47 211 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 IL1RL2Q9HB29 575 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 Q9N2J8 555 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 EQTNQ9NQ60 294 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 TUBA8Q9NY65 449 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 B4GALT7Q9UBV7 327 aa16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 CNOT11Q9UKZ1 510 aaKnown RBP16.99■□□□□ 0.31
PRPF40B-216ENST00000552301 EML6Q6ZMW3 1958 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 TTC36A6NLP5 189 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 CFLARO15519 480 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 EMC8O43402 210 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 ABCB1P08183 1280 aaPredicted RBP16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 CT45A8P0DMV1 189 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 CT45A9P0DMV2 189 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 EPHA3P29320 983 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 CLNS1AP54105 237 aaKnown RBP16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 PRKAG1P54619 331 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 C21orf58P58505 322 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 MRPS22P82650 360 aaKnown RBP16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 MLC1Q15049 377 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 HSP90B2PQ58FF3 399 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 CT45A2Q5DJT8 189 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 PAOXQ6QHF9 649 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 NPSR1Q6W5P4 371 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 LARP4Q71RC2 724 aaKnown RBP eCLIP16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 NUP54Q7Z3B4 507 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 SPATA19Q7Z5L4 167 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 OR5P2Q8WZ92 322 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 COL21A1Q96P44 957 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 MS4A4EQ96PG1 132 aa16.98■□□□□ 0.31
PRPF40B-216ENST00000552301 BHLHE41Q9C0J9 482 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms