RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 CSNK1A1LQ8N752 337 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 SLC16A11Q8NCK7 471 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 FCGR1BQ92637 280 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 ZG16BQ96DA0 208 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 ARHGDIGQ99819 225 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 LRRC61Q9BV99 259 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 TPSD1Q9BZJ3 242 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 IL21RQ9HBE5 538 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 MAN2C1Q9NTJ4 1040 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 SPACA6W5XKT8 324 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 SCN2AQ99250 2005 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 SH3D21A4FU49 640 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 CYR61O00622 381 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 FOXD2O60548 495 aaPredicted RBP13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 GALR3O60755 368 aaPredicted RBP13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 ZIC2O95409 532 aaPredicted RBP13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 LCKP06239 509 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 TYRP1P17643 537 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 C21orf33P30042 268 aaPredicted RBP13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 VSX2P58304 361 aaPredicted RBP13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 HPCAP84074 193 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 TARDBPQ13148 414 aaKnown RBP eCLIP13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 SLX4IPQ5VYV7 408 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 ARMC6Q6NXE6 501 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 CD300LDQ6UXZ3 194 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 PTCHD4Q6ZW05 846 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 DTNBP1Q96EV8 351 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 POLR2J3Q9H1A7 115 aaKnown RBP13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 SEMA6CQ9H3T2 930 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 CLN6Q9NWW5 311 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 GPR83Q9NYM4 423 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 NDOR1Q9UHB4 597 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 POMT2Q9UKY4 750 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 CA14Q9ULX7 337 aa13.13□□□□□ -0.31
RAB3IP-216ENST00000552199 B4DGG1 531 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 TPST2O60704 377 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 SOX14O95416 240 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 IGFBP1P08833 259 aaPredicted RBP13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 STSP08842 583 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 PRKAR1BP31321 381 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 ENTPD1P49961 510 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 PDX1P52945 283 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 EMP3P54852 163 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 ID2Q02363 134 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 COX10Q12887 443 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 COL9A2Q14055 689 aaPredicted RBP13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 TBCEQ15813 527 aaPredicted RBP13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 ZNF628Q5EBL2 1059 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 FHL5Q5TD97 284 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 P2RY8Q86VZ1 359 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 CA13Q8N1Q1 262 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 MORN4Q8NDC4 146 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 TMEM52Q8NDY8 209 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 SIMC1Q8NDZ2 872 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 OR4K5Q8NGD3 323 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 NR4A3Q92570 626 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 SLC9A6Q92581 669 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 CDS1Q92903 461 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 OCEL1Q9H607 264 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 PLGRKTQ9HBL7 147 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 C11orf16Q9NQ32 467 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 NECTIN3Q9NQS3 549 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 SELENONQ9NZV5 590 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 SLC13A4Q9UKG4 626 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 C19orf53Q9UNZ5 99 aaPredicted RBP13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 CHST2Q9Y4C5 530 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 EYSQ5T1H1 3165 aa13.12□□□□□ -0.31
RAB3IP-216ENST00000552199 TLR4O00206 839 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 HCRTR1O43613 425 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 FGF17O60258 216 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 FCMRO60667 390 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 LDB3O75112 727 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 GPR75O95800 540 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 TP53P04637 393 aaPredicted RBP13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 ST6GAL1P15907 406 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 SNRPGP62308 76 aaKnown RBP13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 ALDH6A1Q02252 535 aaKnown RBP13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 FZD5Q13467 585 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 NDUFA9Q16795 377 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 INAVAQ3KP66 663 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 ARHGAP11BQ3KRB8 267 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 TRMT12Q53H54 448 aaKnown RBP13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 C12orf73Q69YU5 71 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 CHRDL2Q6WN34 429 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 FRRS1Q6ZNA5 592 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 ZER1Q7Z7L7 766 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 SHISA5Q8N114 240 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 STX19Q8N4C7 294 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 B3GNT7Q8NFL0 401 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 OR5T3Q8NGG3 340 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 OR52P1PQ8NH57 321 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 CCDC3Q9BQI4 270 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 PRO3102Q9H379 93 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 TRIM45Q9H8W5 580 aaPredicted RBP13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 MTHFD2LQ9H903 347 aaPredicted RBP13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 FAM60AQ9NP50 221 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 STARD5Q9NSY2 213 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 GPR55Q9Y2T6 319 aaPredicted RBP13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 TMEM265A0A087WTH1 108 aa13.11□□□□□ -0.31
RAB3IP-216ENST00000552199 EFCAB10A6NFE3 127 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms