RNA–Protein interactions for RNA: ENST00000551931.5

LETMD1-231, Transcript of LETM1 domain containing 1, human

TSL 3

Gene LETMD1, Length 705 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-231	ENST00000551931	NSUN5	Q96P11	429 aa	Known RBP	11.42	□□□□□ -0.58
LETMD1-231	ENST00000551931	FRG2B	Q96QU4	278 aa		11.42	□□□□□ -0.58
LETMD1-231	ENST00000551931	UCN2	Q96RP3	112 aa		11.42	□□□□□ -0.58
LETMD1-231	ENST00000551931	TM9SF2	Q99805	663 aa		11.42	□□□□□ -0.58
LETMD1-231	ENST00000551931	ZBTB26	Q9HCK0	441 aa		11.42	□□□□□ -0.58
LETMD1-231	ENST00000551931	RNF14	Q9UBS8	474 aa		11.42	□□□□□ -0.58
LETMD1-231	ENST00000551931	ADAM29	Q9UKF5	820 aa		11.42	□□□□□ -0.58
LETMD1-231	ENST00000551931	PLLP	Q9Y342	182 aa		11.42	□□□□□ -0.58
LETMD1-231	ENST00000551931	TESMIN	Q9Y4I5	508 aa		11.42	□□□□□ -0.58
LETMD1-231	ENST00000551931	PCDHA9	Q9Y5H5	950 aa		11.42	□□□□□ -0.58
LETMD1-231	ENST00000551931	TNPO3	Q9Y5L0	923 aa	Known RBP	11.42	□□□□□ -0.58
LETMD1-231	ENST00000551931	CCDC189	A1A4V9	331 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931		A8MXE2	369 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931		B4DXG7	233 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	PLOD2	O00469	737 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	ACOX3	O15254	700 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	ERAL1	O75616	437 aa	Known RBP	11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	CBR3	O75828	277 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	LY6G6D	O95868	133 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	TGM6	O95932	706 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	ALDOA	P04075	364 aa	Known RBP	11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	GCK	P35557	465 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	CPOX	P36551	454 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	LHX2	P50458	406 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	CCNG1	P51959	295 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	MAPK12	P53778	367 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	CLDN18	P56856	261 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	MRPS35	P82673	323 aa	Known RBP	11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	GUCY2D	Q02846	1103 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	TRMT12	Q53H54	448 aa	Known RBP	11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931		Q5PR19	223 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	SHE	Q5VZ18	495 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	ENPP6	Q6UWR7	440 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	COMMD6	Q7Z4G1	85 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	CCDC91	Q7Z6B0	441 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	CIART	Q8N365	385 aa	Predicted RBP	11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	METTL4	Q8N3J2	472 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	SPATA4	Q8NEY3	305 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	OR52R1	Q8NGF1	315 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	ZNF592	Q92610	1267 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	ATP6V1E2	Q96A05	226 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	NTMT1	Q9BV86	223 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	FARSB	Q9NSD9	589 aa	Known RBP	11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	FBXL2	Q9UKC9	423 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	PCTP	Q9UKL6	214 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	PACSIN3	Q9UKS6	424 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	CFL2	Q9Y281	166 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	SON	P18583	2426 aa	Known RBP	11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	USF3	Q68DE3	2245 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	MXRA5	Q9NR99	2828 aa		11.41	□□□□□ -0.58
LETMD1-231	ENST00000551931	FBN1	P35555	2871 aa	Known RBP	11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931		A0A1W2PNV4	684 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	C1orf226	A1L170	272 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	GOLGA6L10	A6NI86	522 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	C17orf51	A8MQB3	221 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	NME6	O75414	186 aa	Predicted RBP	11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	ZNF708	P17019	499 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	CSNK2A2	P19784	350 aa	Predicted RBP	11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	TCEA1	P23193	301 aa	Known RBP	11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	EMD	P50402	254 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	HMGCS1	Q01581	520 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	FAM27E3	Q08E93	113 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	GALNT1	Q10472	559 aa	Predicted RBP	11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	SGO1	Q5FBB7	561 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	UBAP2	Q5T6F2	1119 aa	Known RBP	11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	TTC19	Q6DKK2	380 aa	Predicted RBP	11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	METTL2B	Q6P1Q9	378 aa	Known RBP	11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	KLC3	Q6P597	504 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	RPS27L	Q71UM5	84 aa	Known RBP	11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	PAGE2	Q7Z2X7	111 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	GRAMD2A	Q8IUY3	354 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	TMBIM1	Q969X1	311 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	TM4SF18	Q96CE8	201 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	KLHL29	Q96CT2	875 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	PHF21B	Q96EK2	531 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	CNRIP1	Q96F85	164 aa	Predicted RBP	11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	COX4I2	Q96KJ9	171 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	PIGM	Q9H3S5	423 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	ANKRA2	Q9H9E1	313 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	TAS2R10	Q9NYW0	307 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	AHSP	Q9NZD4	102 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	SLC12A4	Q9UP95	1085 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	WIF1	Q9Y5W5	379 aa		11.4	□□□□□ -0.58
LETMD1-231	ENST00000551931	FRG2C	A6NGY1	282 aa		11.39	□□□□□ -0.59
LETMD1-231	ENST00000551931	OR6C70	A6NIJ9	312 aa		11.39	□□□□□ -0.59
LETMD1-231	ENST00000551931	DEFB108A	A8MXU0	73 aa		11.39	□□□□□ -0.59
LETMD1-231	ENST00000551931		H7C1Q1	480 aa		11.39	□□□□□ -0.59
LETMD1-231	ENST00000551931	CASK	O14936	926 aa		11.39	□□□□□ -0.59
LETMD1-231	ENST00000551931	T	O15178	435 aa		11.39	□□□□□ -0.59
LETMD1-231	ENST00000551931	HCRTR2	O43614	444 aa		11.39	□□□□□ -0.59
LETMD1-231	ENST00000551931	PCSK2	P16519	638 aa		11.39	□□□□□ -0.59
LETMD1-231	ENST00000551931	DRD5	P21918	477 aa		11.39	□□□□□ -0.59
LETMD1-231	ENST00000551931	TYK2	P29597	1187 aa		11.39	□□□□□ -0.59
LETMD1-231	ENST00000551931	SRD5A2	P31213	254 aa		11.39	□□□□□ -0.59
LETMD1-231	ENST00000551931	DEK	P35659	375 aa	Known RBP	11.39	□□□□□ -0.59
LETMD1-231	ENST00000551931	PPIC	P45877	212 aa		11.39	□□□□□ -0.59
LETMD1-231	ENST00000551931	SERPINB8	P50452	374 aa		11.39	□□□□□ -0.59
LETMD1-231	ENST00000551931	CHD3	Q12873	2000 aa	Known RBP	11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms