RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 KLHL35Q6PF15 583 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 OGFOD3Q6PK18 319 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 DHRS4L2Q6PKH6 230 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 Q7L0L9 218 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 C16orf62Q7Z3J2 963 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 ERI1Q8IV48 349 aaKnown RBP10.77□□□□□ -0.69
RAB5C-208ENST00000551338 MCATQ8IVS2 390 aaKnown RBP10.77□□□□□ -0.69
RAB5C-208ENST00000551338 NLGN4XQ8N0W4 816 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 CAMKK1Q8N5S9 505 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 SLC16A11Q8NCK7 471 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 OR9A4Q8NGU2 314 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 ZNF675Q8TD23 568 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 FAR1Q8WVX9 515 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 ANKRD9Q96BM1 317 aaPredicted RBP10.77□□□□□ -0.69
RAB5C-208ENST00000551338 GUCD1Q96NT3 240 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.77□□□□□ -0.69
RAB5C-208ENST00000551338 ZNF556Q9HAH1 456 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 ANKHQ9HCJ1 492 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 RASSF1Q9NS23 344 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 MAN2C1Q9NTJ4 1040 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 SCN3BQ9NY72 215 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 TMEM9Q9P0T7 183 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 REV1Q9UBZ9 1251 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 ENOPH1Q9UHY7 261 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 TMCC3Q9ULS5 477 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 DOLKQ9UPQ8 538 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 MGAT4BQ9UQ53 548 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 SLC9A8Q9Y2E8 581 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 GPR55Q9Y2T6 319 aaPredicted RBP10.77□□□□□ -0.69
RAB5C-208ENST00000551338 PCDHGB1Q9Y5G3 927 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 PCDHGA10Q9Y5H3 936 aa10.77□□□□□ -0.69
RAB5C-208ENST00000551338 SH3PXD2BA1X283 911 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 TRIM64BA6NI03 449 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 PTGES3LE9PB15 166 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 H3BMQ9 156 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 CHST10O43529 356 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 FOXS1O43638 330 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 MRPS14O60783 128 aaKnown RBP10.76□□□□□ -0.69
RAB5C-208ENST00000551338 SDC3O75056 442 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 TRMUO75648 421 aaKnown RBP10.76□□□□□ -0.69
RAB5C-208ENST00000551338 UGT2B17O75795 530 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 PIAS2O75928 621 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 SLITRK5O94991 958 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 ATE1O95260 518 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 TP53P04637 393 aaPredicted RBP10.76□□□□□ -0.69
RAB5C-208ENST00000551338 CT62P0C5K7 136 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 NT5EP21589 574 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 CHMP24386 653 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 MAP2K4P45985 399 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 CRISP1P54107 249 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 UGT2B15P54855 530 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 GP2P55259 537 aaKnown RBP10.76□□□□□ -0.69
RAB5C-208ENST00000551338 GFERP55789 205 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 SMIM11AP58511 58 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 ZP2Q05996 745 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 FOXD4Q12950 439 aaPredicted RBP10.76□□□□□ -0.69
RAB5C-208ENST00000551338 PIN1Q13526 163 aaPredicted RBP10.76□□□□□ -0.69
RAB5C-208ENST00000551338 DEFB133Q30KQ1 61 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 ARHGAP11BQ3KRB8 267 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 PUS10Q3MIT2 529 aaKnown RBP10.76□□□□□ -0.69
RAB5C-208ENST00000551338 C14orf28Q4W4Y0 310 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 ZNF311Q5JNZ3 666 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 TYW3Q6IPR3 259 aaKnown RBP10.76□□□□□ -0.69
RAB5C-208ENST00000551338 SLC36A4Q6YBV0 504 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 FAM92BQ6ZTR7 304 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 CCDC103Q8IW40 242 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 DEPDC4Q8N2C3 294 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 RHOXF1Q8NHV9 184 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 SLC9A6Q92581 669 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 TANKQ92844 425 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 ZG16BQ96DA0 208 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 SPACA7Q96KW9 195 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 COG8Q96MW5 612 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 ZNF285Q96NJ3 590 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 SLC38A3Q99624 504 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 DGCR6LQ9BY27 220 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 CCDC90BQ9GZT6 254 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 CCNB1IP1Q9NPC3 277 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 ADAP2Q9NPF8 381 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 PLCXD1Q9NUJ7 323 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 DNAAF2Q9NVR5 837 aaKnown RBP10.76□□□□□ -0.69
RAB5C-208ENST00000551338 FKBP14Q9NWM8 211 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 ADAMTS9Q9P2N4 1935 aa10.76□□□□□ -0.69
RAB5C-208ENST00000551338 FER1L5A0AVI2 2057 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 A0A0A6YYC8 382 aaPredicted RBP10.75□□□□□ -0.69
RAB5C-208ENST00000551338 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 A0A1W2PRQ8 180 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 TLCD2A6NGC4 264 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 DUXAA6NLW8 204 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 ZNF99A8MXY4 864 aaPredicted RBP10.75□□□□□ -0.69
RAB5C-208ENST00000551338 LMO7DNF2Z398 122 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 TMX2-CTNND1H3BSU7 103 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 TGFBR3LH3BV60 316 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 I3L1I5 382 aaPredicted RBP10.75□□□□□ -0.69
RAB5C-208ENST00000551338 M0R129 80 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 FRS3O43559 492 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 RGS10O43665 173 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 OR10H3O60404 316 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 PLOD3O60568 738 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 SRPX2O60687 465 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms