RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 LINC00518Q8N0U6 118 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 LILRB1Q8NHL6 650 aaPredicted RBP11.44□□□□□ -0.58
VDR-208ENST00000550325 CLP1Q92989 425 aaKnown RBP11.44□□□□□ -0.58
VDR-208ENST00000550325 OR2M2Q96R28 347 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 KCNJ15Q99712 375 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 PLA2G12AQ9BZM1 189 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 HPF1Q9NWY4 346 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 NFKBIL1Q9UBC1 381 aaPredicted RBP11.44□□□□□ -0.58
VDR-208ENST00000550325 MGAT4CQ9UBM8 478 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 ZNF69Q9UC07 566 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 FKBP7Q9Y680 259 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 FAM183AA6NL82 134 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 NTN1O95631 604 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 MMP11P24347 488 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 FNTBP49356 437 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 PFN3P60673 137 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 RAE1P78406 368 aaKnown RBP11.44□□□□□ -0.58
VDR-208ENST00000550325 DGCR2P98153 550 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 SNTB2Q13425 540 aaKnown RBP11.44□□□□□ -0.58
VDR-208ENST00000550325 RIN1Q13671 783 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 TAF1CQ15572 869 aaPredicted RBP11.44□□□□□ -0.58
VDR-208ENST00000550325 CD276Q5ZPR3 534 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 SLC30A6Q6NXT4 461 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 OR52H1Q8NGJ2 320 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 GCDHQ92947 438 aaPredicted RBP11.44□□□□□ -0.58
VDR-208ENST00000550325 SUSD3Q96L08 255 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 GSDMCQ9BYG8 508 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 KCNK12Q9HB15 430 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 NUMA1Q14980 2115 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 ANHXE9PGG2 379 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 GAPDHSO14556 408 aaPredicted RBP11.44□□□□□ -0.58
VDR-208ENST00000550325 CXCL11O14625 94 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 PGRMC2O15173 223 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 ARPC5O15511 151 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 HLA-DQB1P01920 261 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 HPXP02790 462 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 ZP3P21754 424 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 SLC1A3P43003 542 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 PREPP48147 710 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 MANFP55145 182 aaKnown RBP11.44□□□□□ -0.58
VDR-208ENST00000550325 C12orf73Q69YU5 71 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 SLC36A4Q6YBV0 504 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 KLHL36Q8N4N3 616 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 MEIOBQ8N635 442 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 TRMT10AQ8TBZ6 339 aaKnown RBP11.44□□□□□ -0.58
VDR-208ENST00000550325 ARMC5Q96C12 935 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 SLC38A2Q96QD8 506 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 FUZQ9BT04 418 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 MED18Q9BUE0 208 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 SLC12A9Q9BXP2 914 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 CFAP97Q9P2B7 532 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 SCP2D1Q9UJQ7 156 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 PADI3Q9ULW8 664 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 TRPV2Q9Y5S1 764 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 NUBP2Q9Y5Y2 271 aa11.44□□□□□ -0.58
VDR-208ENST00000550325 FXYD6-FXYD2A0A087WZ82 144 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 ARPC4-TTLL3A0A0A6YYG9 625 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 TRDV1A0A1B0GX56 115 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 RNASET2O00584 256 aaKnown RBP11.43□□□□□ -0.58
VDR-208ENST00000550325 KHNYNO15037 678 aaKnown RBP11.43□□□□□ -0.58
VDR-208ENST00000550325 SMAD6O43541 496 aaKnown RBP11.43□□□□□ -0.58
VDR-208ENST00000550325 CBX7O95931 251 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 C8GP07360 202 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 ZNF8P17098 575 aaPredicted RBP11.43□□□□□ -0.58
VDR-208ENST00000550325 LGALS3BPQ08380 585 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 ZNF763Q0D2J5 394 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 EIF2B5Q13144 721 aaKnown RBP11.43□□□□□ -0.58
VDR-208ENST00000550325 TPBGQ13641 420 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 ARHGAP15Q53QZ3 475 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 C3orf38Q5JPI3 329 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 SHEQ5VZ18 495 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 ZNF770Q6IQ21 691 aaPredicted RBP11.43□□□□□ -0.58
VDR-208ENST00000550325 MACC1Q6ZN28 852 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 NLRC3Q7RTR2 1065 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 COMMD6Q7Z4G1 85 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 SYT9Q86SS6 491 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 HORMAD2Q8N7B1 307 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 SLC38A5Q8WUX1 472 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 SGIP1Q9BQI5 828 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 UQCC2Q9BRT2 126 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 FXYD6Q9H0Q3 95 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 FZD3Q9NPG1 666 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 CD93Q9NPY3 652 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 COPZ2Q9P299 210 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 F11P03951 625 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 LIMS3P0CW19 117 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 LIMS4P0CW20 117 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 ACP2P11117 423 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 HK1P19367 917 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 CCNJQ5T5M9 372 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 SMARCD3Q6STE5 483 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 FAM198BQ6UWH4 519 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 GPR142Q7Z601 462 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 OR10Z1Q8NGY1 313 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 ADAMTS19Q8TE59 1207 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 SCMH1Q96GD3 660 aa11.43□□□□□ -0.58
VDR-208ENST00000550325 FUBP3Q96I24 572 aaKnown RBP eCLIP11.43□□□□□ -0.58
VDR-208ENST00000550325 ZNF578Q96N58 590 aaPredicted RBP11.43□□□□□ -0.58
VDR-208ENST00000550325 ZNF436Q9C0F3 470 aaPredicted RBP11.43□□□□□ -0.58
VDR-208ENST00000550325 SPATA6Q9NWH7 488 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms