RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 TO15178 435 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 PEX1O43933 1283 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 SLC22A3O75751 556 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 ABCB1P08183 1280 aaPredicted RBP20.75■□□□□ 0.91
BRF1-216ENST00000550208 VIMP08670 466 aaKnown RBP20.75■□□□□ 0.91
BRF1-216ENST00000550208 CCL3P10147 92 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 ABCD3P28288 659 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 FBXW4P57775 412 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 FAM174BQ3ZCQ3 159 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 PAOXQ6QHF9 649 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 SLC44A2Q8IWA5 706 aaPredicted RBP20.75■□□□□ 0.91
BRF1-216ENST00000550208 GOLM1Q8NBJ4 401 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 FAM13CQ8NE31 585 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 OR10G3Q8NGC4 313 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 OR4N2Q8NGD1 307 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 PSMA8Q8TAA3 256 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 FAM120BQ96EK7 910 aaKnown RBP20.75■□□□□ 0.91
BRF1-216ENST00000550208 GIMAP5Q96F15 307 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 ZBTB18Q99592 522 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 CCDC134Q9H6E4 229 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 SH2D2AQ9NP31 389 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 EQTNQ9NQ60 294 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 SDR39U1Q9NRG7 319 aaPredicted RBP20.75■□□□□ 0.91
BRF1-216ENST00000550208 DEPPQ9NTK1 212 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 RYDENQ9NUL5 291 aaKnown RBP20.75■□□□□ 0.91
BRF1-216ENST00000550208 FGFR1OP2Q9NVK5 253 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 KLF13Q9Y2Y9 288 aaPredicted RBP20.75■□□□□ 0.91
BRF1-216ENST00000550208 EML6Q6ZMW3 1958 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 ZNF462Q96JM2 2506 aa20.75■□□□□ 0.91
BRF1-216ENST00000550208 PRSS51A0A1B0GVH4 220 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 CAPN14A8MX76 684 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 G3V3Y1 287 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 RNASET2O00584 256 aaKnown RBP20.74■□□□□ 0.91
BRF1-216ENST00000550208 ACOX3O15254 700 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 CPSF4O95639 269 aaKnown RBP20.74■□□□□ 0.91
BRF1-216ENST00000550208 PLA2G2AP14555 144 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 CNR1P21554 472 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 CCT3P49368 545 aaKnown RBP20.74■□□□□ 0.91
BRF1-216ENST00000550208 GPR85P60893 370 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 HBA1P69905 142 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 PSG6Q00889 435 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 INAQ16352 499 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 NTRK2Q16620 822 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 ANXA8L1Q5VT79 327 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 SLC22A10Q63ZE4 541 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 DESI1Q6ICB0 168 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 SZRD1Q7Z422 152 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 ANKRD46Q86W74 232 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 DND1Q8IYX4 353 aaKnown RBP20.74■□□□□ 0.91
BRF1-216ENST00000550208 MIB2Q96AX9 1013 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 OMA1Q96E52 524 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 C16orf58Q96GQ5 468 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 BARD1Q99728 777 aaKnown RBP20.74■□□□□ 0.91
BRF1-216ENST00000550208 ZIM2Q9NZV7 527 aa20.74■□□□□ 0.91
BRF1-216ENST00000550208 KLRC4-KLRK1H3BQV0 150 aa20.73■□□□□ 0.91
BRF1-216ENST00000550208 PPM1BO75688 479 aa20.73■□□□□ 0.91
BRF1-216ENST00000550208 NAGAP17050 411 aa20.73■□□□□ 0.91
BRF1-216ENST00000550208 ZFP36L2P47974 494 aaKnown RBP20.73■□□□□ 0.91
BRF1-216ENST00000550208 MEOX1P50221 254 aa20.73■□□□□ 0.91
BRF1-216ENST00000550208 SF3A3Q12874 501 aaKnown RBP eCLIP20.73■□□□□ 0.919e-7■■■■■ 44.5
BRF1-216ENST00000550208 GAB1Q13480 694 aa20.73■□□□□ 0.91
BRF1-216ENST00000550208 DPY19L1Q2PZI1 675 aa20.73■□□□□ 0.91
BRF1-216ENST00000550208 FAM180AQ6UWF9 173 aa20.73■□□□□ 0.91
BRF1-216ENST00000550208 SLC34A3Q8N130 599 aa20.73■□□□□ 0.91
BRF1-216ENST00000550208 MIER2Q8N344 545 aa20.73■□□□□ 0.91
BRF1-216ENST00000550208 CPSF7Q8N684 471 aaKnown RBP20.73■□□□□ 0.91
BRF1-216ENST00000550208 GLB1L3Q8NCI6 653 aaPredicted RBP20.73■□□□□ 0.91
BRF1-216ENST00000550208 VPS37AQ8NEZ2 397 aa20.73■□□□□ 0.91
BRF1-216ENST00000550208 PAQR8Q8TEZ7 354 aa20.73■□□□□ 0.91
BRF1-216ENST00000550208 FAR1Q8WVX9 515 aa20.73■□□□□ 0.91
BRF1-216ENST00000550208 TMBIM1Q969X1 311 aa20.73■□□□□ 0.91
BRF1-216ENST00000550208 YIPF4Q9BSR8 244 aa20.73■□□□□ 0.91
BRF1-216ENST00000550208 LMF2Q9BU23 707 aaKnown RBP20.73■□□□□ 0.91
BRF1-216ENST00000550208 SACM1LQ9NTJ5 587 aa20.73■□□□□ 0.91
BRF1-216ENST00000550208 ZCCHC3Q9NUD5 404 aaKnown RBP20.73■□□□□ 0.91
BRF1-216ENST00000550208 CHCHD2Q9Y6H1 151 aaPredicted RBP20.73■□□□□ 0.91
BRF1-216ENST00000550208 A0A0G2JMM0 328 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 A0A0G2JND7 137 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 A0A1W2PPB8 328 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 A0A1W2PRS3 328 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 PINLYPA6NC86 204 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 ASPDHA6ND91 283 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 KIR3DP1A8MWS1 328 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 REM1O75628 298 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 WISP2O76076 250 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 P04436 131 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 GABRA3P34903 492 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 PIGAP37287 484 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 MAP3K8P41279 467 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 PLCXD2Q0VAA5 305 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 SPDYE7PQ495Y7 208 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 ZNF324BQ6AW86 544 aaPredicted RBP20.72■□□□□ 0.91
BRF1-216ENST00000550208 CGB2Q6NT52 195 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 NUP54Q7Z3B4 507 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 BCORP1Q8N888 145 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 FAM98AQ8NCA5 519 aaKnown RBP20.72■□□□□ 0.91
BRF1-216ENST00000550208 OR4A15Q8NGL6 344 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 OR9I1Q8NGQ6 314 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 DNAJB8Q8NHS0 232 aa20.72■□□□□ 0.91
BRF1-216ENST00000550208 OR52E6Q96RD3 313 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms