RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 C19orf84I3L1E1 186 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 GNB5O14775 395 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 RGS14O43566 566 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 PLOD3O60568 738 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 PEX11AO75192 247 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 ESRRAP11474 423 aaPredicted RBP8.96□□□□□ -0.98
HDAC7-229ENST00000549883 BCKDHAP12694 445 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 DRD5P21918 477 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 PPICP45877 212 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 PLCXD2Q0VAA5 305 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 CHI3L2Q15782 390 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 HYAL4Q2M3T9 481 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.96□□□□□ -0.98
HDAC7-229ENST00000549883 BNC2Q6ZN30 1099 aaPredicted RBP8.96□□□□□ -0.98
HDAC7-229ENST00000549883 RNF165Q6ZSG1 346 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 NUDCD3Q8IVD9 361 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 C17orf47Q8NEP4 570 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 FAM76AQ8TAV0 307 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 TMBIM1Q969X1 311 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 PPP1R36Q96LQ0 422 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 GNRHR2Q96P88 292 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 SORT1Q99523 831 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 CCT7Q99832 543 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 C1orf50Q9BV19 199 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 ANGPTL4Q9BY76 406 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 ZFP64Q9NPA5 681 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 GIMAP4Q9NUV9 329 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 TAS2R7Q9NYW3 318 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 FLRT3Q9NZU0 649 aa8.96□□□□□ -0.98
HDAC7-229ENST00000549883 A0A1B0GVC2 190 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 ANKRD33BA6NCL7 494 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 FRG2CA6NGY1 282 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 PRSS44E7EML9 344 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 ACOT7O00154 380 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 UPK1AO00322 258 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 PRRG2O14669 202 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 TO15178 435 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 ERN1O75460 977 aaKnown RBP8.95□□□□□ -0.98
HDAC7-229ENST00000549883 BGNP21810 368 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 MPIP34949 423 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 CDK9P50750 372 aaKnown RBP8.95□□□□□ -0.98
HDAC7-229ENST00000549883 CASP6P55212 293 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 NRG3P56975 720 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 WDR4P57081 412 aaKnown RBP8.95□□□□□ -0.98
HDAC7-229ENST00000549883 PSG6Q00889 435 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 HSPB3Q12988 150 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 PDE7AQ13946 482 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 SLC10A1Q14973 349 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 GXYLT1Q4G148 440 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 C6orf136Q5SQH8 315 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 BEND6Q5SZJ8 279 aaPredicted RBP8.95□□□□□ -0.98
HDAC7-229ENST00000549883 RTL6Q6ICC9 239 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 ARHGAP11AQ6P4F7 1023 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 SLC44A2Q8IWA5 706 aaPredicted RBP8.95□□□□□ -0.98
HDAC7-229ENST00000549883 DND1Q8IYX4 353 aaKnown RBP8.95□□□□□ -0.98
HDAC7-229ENST00000549883 KRTCAP2Q8N6L1 136 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 ZNF781Q8N8C0 355 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 OR7A2PQ8NGA2 310 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 EFHD2Q96C19 240 aaPredicted RBP8.95□□□□□ -0.98
HDAC7-229ENST00000549883 ELP4Q96EB1 424 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 HSPBAP1Q96EW2 488 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 BTBD9Q96Q07 612 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 RTN4RQ9BZR6 473 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 EML4Q9HC35 981 aaKnown RBP8.95□□□□□ -0.98
HDAC7-229ENST00000549883 KCNK9Q9NPC2 374 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 SENP1Q9P0U3 644 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 SUCOQ9UBS9 1254 aaKnown RBP8.95□□□□□ -0.98
HDAC7-229ENST00000549883 C19orf53Q9UNZ5 99 aaPredicted RBP8.95□□□□□ -0.98
HDAC7-229ENST00000549883 SLC6A5Q9Y345 797 aa8.95□□□□□ -0.98
HDAC7-229ENST00000549883 TRGV5A0A0B4J1U4 118 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 GXYLT2A0PJZ3 443 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 E9PLN8 166 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 TP53I11O14683 189 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 TSPAN2O60636 221 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 ICOSLGO75144 302 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 REM1O75628 298 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 PSMG1O95456 288 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 HSPA4LO95757 839 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 CHEK2O96017 543 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 IGKV1D-16P01601 117 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 NEFHP12036 1026 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 CYP4B1P13584 511 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 PRF1P14222 555 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 GDF1P27539 372 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 PTPN6P29350 595 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 GSTM5P46439 218 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 MAN2A2P49641 1150 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 WNT3P56703 355 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 NUP107P57740 925 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 ABCE1P61221 599 aaKnown RBP8.94□□□□□ -0.98
HDAC7-229ENST00000549883 ZNF155Q12901 538 aaPredicted RBP8.94□□□□□ -0.98
HDAC7-229ENST00000549883 PTGR1Q14914 329 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 EIPR1Q53HC9 387 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 DCST1Q5T197 706 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 IL23RQ5VWK5 629 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 SP5Q6BEB4 398 aaPredicted RBP8.94□□□□□ -0.98
HDAC7-229ENST00000549883 OR5M10Q6IEU7 315 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 ZNF585AQ6P3V2 769 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 ANGPTL8Q6UXH0 198 aa8.94□□□□□ -0.98
HDAC7-229ENST00000549883 RGS9BPQ6ZS82 235 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms