RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 PRODH2Q9UF12 536 aa12.26□□□□□ -0.45
GCN1-206ENST00000549815 STK38LQ9Y2H1 464 aa12.26□□□□□ -0.45
GCN1-206ENST00000549815 TIMM22Q9Y584 194 aa12.26□□□□□ -0.45
GCN1-206ENST00000549815 ZNF780BQ9Y6R6 833 aa12.26□□□□□ -0.45
GCN1-206ENST00000549815 VPS13CQ709C8 3753 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 A0A1W2PPM1 405 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 FRG2CA6NGY1 282 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 CT45A8P0DMV1 189 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 CT45A9P0DMV2 189 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 TIA1P31483 386 aaKnown RBP eCLIP12.25□□□□□ -0.45
GCN1-206ENST00000549815 TIMP3P35625 211 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 PLCXD2Q0VAA5 305 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 PRSS53Q2L4Q9 553 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 SPIN4Q56A73 249 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 CT45A2Q5DJT8 189 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 WIPI1Q5MNZ9 446 aaPredicted RBP12.25□□□□□ -0.45
GCN1-206ENST00000549815 NSUN5P2Q63ZY6 315 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 ANGPTL8Q6UXH0 198 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 WDR53Q7Z5U6 358 aaPredicted RBP12.25□□□□□ -0.45
GCN1-206ENST00000549815 LACC1Q8IV20 430 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 WDSUB1Q8N9V3 476 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 LRRN4CLQ8ND94 238 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 FAM83FQ8NEG4 500 aaPredicted RBP12.25□□□□□ -0.45
GCN1-206ENST00000549815 OR1J4Q8NGS1 313 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 OR9A2Q8NGT5 310 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.25□□□□□ -0.45
GCN1-206ENST00000549815 RNF138Q8WVD3 245 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 EXOSC8Q96B26 276 aaKnown RBP12.25□□□□□ -0.45
GCN1-206ENST00000549815 ERP27Q96DN0 273 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 SLC35A4Q96G79 324 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 VSTM2LQ96N03 204 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 BTBD9Q96Q07 612 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 SH3GL2Q99962 352 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 RHOXF2Q9BQY4 288 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 ZNF559Q9BR84 538 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 METTL7AQ9H8H3 244 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 SLC24A3Q9HC58 644 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 GALNT9Q9HCQ5 603 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 EHD3Q9NZN3 535 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 DCDC2Q9UHG0 476 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 DOCK7Q96N67 2140 aa12.25□□□□□ -0.45
GCN1-206ENST00000549815 ANKHD1Q8IWZ3 2542 aaKnown RBP12.25□□□□□ -0.45
GCN1-206ENST00000549815 ZFHX3Q15911 3703 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 C2orf72A6NCS6 295 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 MBD3L4A6NDZ8 208 aaPredicted RBP12.24□□□□□ -0.45
GCN1-206ENST00000549815 MBD3L3A6NE82 208 aaPredicted RBP12.24□□□□□ -0.45
GCN1-206ENST00000549815 OR6C70A6NIJ9 312 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 MBD3L5A6NJ08 208 aaPredicted RBP12.24□□□□□ -0.45
GCN1-206ENST00000549815 B4DXG7 233 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 SYT5O00445 386 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 TSPAN2O60636 221 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 NME6O75414 186 aaPredicted RBP12.24□□□□□ -0.45
GCN1-206ENST00000549815 BCAS2O75934 225 aaPredicted RBP12.24□□□□□ -0.45
GCN1-206ENST00000549815 ZNF136P52737 540 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 NAGLUP54802 743 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 HEPACAMQ14CZ8 416 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 FBXL19-AS1Q494R0 122 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 CES4AQ5XG92 561 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 SCIMPQ6UWF3 145 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 ARSKQ6UWY0 536 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 NPSR1Q6W5P4 371 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 ZYG11AQ6WRX3 759 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 YRDCQ86U90 279 aaKnown RBP12.24□□□□□ -0.45
GCN1-206ENST00000549815 HRNRQ86YZ3 2850 aaPredicted RBP12.24□□□□□ -0.45
GCN1-206ENST00000549815 GSPT2Q8IYD1 628 aaKnown RBP12.24□□□□□ -0.45
GCN1-206ENST00000549815 PM20D2Q8IYS1 436 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 MBD3L2Q8NHZ7 208 aaPredicted RBP12.24□□□□□ -0.45
GCN1-206ENST00000549815 KAT2AQ92830 837 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 ABTB1Q969K4 478 aaPredicted RBP12.24□□□□□ -0.45
GCN1-206ENST00000549815 TMBIM1Q969X1 311 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 EBPLQ9BY08 206 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 OR2B2Q9GZK3 357 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 SLC35C2Q9NQQ7 365 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 TBK1Q9UHD2 729 aa12.24□□□□□ -0.45
GCN1-206ENST00000549815 EXO1Q9UQ84 846 aaKnown RBP12.24□□□□□ -0.45
GCN1-206ENST00000549815 GNG14A0A1W2PPG7 69 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 FAM221AA4D161 298 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 PRAMEF25A6NGN4 478 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 CD8B2A6NJW9 211 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 MYO1GB0I1T2 1018 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 PLOD3O60568 738 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 GLRA3O75311 464 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 PROCP04070 461 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 SHBGP04278 402 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 GSTM5P46439 218 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 CORO7P57737 925 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 ACSM2AQ08AH3 577 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 MYBPHQ13203 477 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 SNTB1Q13884 538 aaKnown RBP12.23□□□□□ -0.45
GCN1-206ENST00000549815 TOMM20Q15388 145 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 ACSM2BQ68CK6 577 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 SPNS3Q6ZMD2 512 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 SAMD14Q8IZD0 417 aaPredicted RBP12.23□□□□□ -0.45
GCN1-206ENST00000549815 CNPY4Q8N129 248 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 OR7G2Q8NG99 324 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 CCDC126Q96EE4 140 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 COL21A1Q96P44 957 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 FOLH1BQ9HBA9 442 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 TNFRSF12AQ9NP84 129 aa12.23□□□□□ -0.45
GCN1-206ENST00000549815 MID1IP1Q9NPA3 183 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms