RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 DCAF7P61962 342 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 RPS26P62854 115 aaKnown RBP16.18■□□□□ 0.18
LETMD1-220ENST00000549686 CDK6Q00534 326 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 SCARB2Q14108 478 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 GLYATQ6IB77 296 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 IL22RA1Q8N6P7 574 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 GOLM1Q8NBJ4 401 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 HIPK4Q8NE63 616 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 XAGE5Q8WWM1 108 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 FAM122AQ96E09 287 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 VMP1Q96GC9 406 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 C16orf58Q96GQ5 468 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 VSTM2LQ96N03 204 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 PCDHAC1Q9H158 963 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 ANKRA2Q9H9E1 313 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 FOLH1BQ9HBA9 442 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 EGFL7Q9UHF1 273 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 AK5Q9Y6K8 562 aa16.18■□□□□ 0.18
LETMD1-220ENST00000549686 AQP12BA6NM10 295 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 HRKO00198 91 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 ARPC2O15144 300 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 SORBS2O94875 1100 aaKnown RBP16.17■□□□□ 0.18
LETMD1-220ENST00000549686 NKX2-2O95096 273 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 NUDT7P0C024 238 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 TFPTP0C1Z6 253 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 POLE2P56282 527 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 MS4A2Q01362 244 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 EEF1A2Q05639 463 aaKnown RBP16.17■□□□□ 0.18
LETMD1-220ENST00000549686 DUSP8Q13202 625 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 ELOAQ14241 798 aaKnown RBP16.17■□□□□ 0.18
LETMD1-220ENST00000549686 MYBPC3Q14896 1274 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 EXT1Q16394 746 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 HEPHL1Q6MZM0 1159 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 REEP3Q6NUK4 255 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 SLC29A4Q7RTT9 530 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 RAB43Q86YS6 212 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 AQP12AQ8IXF9 295 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 C17orf47Q8NEP4 570 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 NFAM1Q8NET5 270 aaPredicted RBP16.17■□□□□ 0.18
LETMD1-220ENST00000549686 OR8K3Q8NH51 312 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 C16orf52Q8NHV5 167 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 SLC9A6Q92581 669 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 NCLNQ969V3 563 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 NSMCE2Q96MF7 247 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 RNF145Q96MT1 663 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 IP6K3Q96PC2 410 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 TRNT1Q96Q11 434 aaKnown RBP16.17■□□□□ 0.18
LETMD1-220ENST00000549686 WDR77Q9BQA1 342 aaPredicted RBP16.17■□□□□ 0.18
LETMD1-220ENST00000549686 SEMA4CQ9C0C4 833 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 DENND2DQ9H6A0 471 aaPredicted RBP16.17■□□□□ 0.18
LETMD1-220ENST00000549686 RYDENQ9NUL5 291 aaKnown RBP16.17■□□□□ 0.18
LETMD1-220ENST00000549686 HS3ST3B1Q9Y662 390 aa16.17■□□□□ 0.18
LETMD1-220ENST00000549686 IGHV1-45A0A0A0MS14 117 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 PDE9AO76083 593 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 IFNA14P01570 189 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 CLPSP04118 112 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 GUSBP08236 651 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 NR2F1P10589 423 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 ACP2P11117 423 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 HOXB6P17509 224 aaKnown RBP16.16■□□□□ 0.18
LETMD1-220ENST00000549686 MSX2P35548 267 aaPredicted RBP16.16■□□□□ 0.18
LETMD1-220ENST00000549686 PPICP45877 212 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 GPR143P51810 404 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 CRISP3P54108 245 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 CASP9P55211 416 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 FOXL2P58012 376 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 SLC26A5P58743 744 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 HPCAP84074 193 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 FOXC1Q12948 553 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 KPNB1Q14974 876 aaKnown RBP16.16■□□□□ 0.18
LETMD1-220ENST00000549686 HLA-DQA1Q5Y7H0 255 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 CCDC80Q76M96 950 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 NDUFAF7Q7L592 441 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 C16orf62Q7Z3J2 963 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 PATL1Q86TB9 770 aaKnown RBP16.16■□□□□ 0.18
LETMD1-220ENST00000549686 EID3Q8N140 333 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 COX18Q8N8Q8 333 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 SLC16A11Q8NCK7 471 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 SIMC1Q8NDZ2 872 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 CHDHQ8NE62 594 aaPredicted RBP16.16■□□□□ 0.18
LETMD1-220ENST00000549686 OR5D16Q8NGK9 328 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 DOK4Q8TEW6 326 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 SLC38A5Q8WUX1 472 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 FIG4Q92562 907 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 PMM1Q92871 262 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 RAB8BQ92930 207 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 MAL2Q969L2 176 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 SLC35A4Q96G79 324 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 BTBD9Q96Q07 612 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 YIPF4Q9BSR8 244 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 NUDT9Q9BW91 350 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 BTBD2Q9BX70 525 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 GPN2Q9H9Y4 310 aaPredicted RBP16.16■□□□□ 0.18
LETMD1-220ENST00000549686 BCL2L10Q9HD36 194 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 Q9N2J8 555 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 POLE3Q9NRF9 147 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 GMPR2Q9P2T1 348 aaKnown RBP16.16■□□□□ 0.18
LETMD1-220ENST00000549686 USP22Q9UPT9 525 aa16.16■□□□□ 0.18
LETMD1-220ENST00000549686 LOC101059948A0A1B0GTJ6 334 aa16.15■□□□□ 0.18
LETMD1-220ENST00000549686 TRABD2BA6NFA1 517 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms