RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 PSG6Q00889 435 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 STX5Q13190 355 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 NFYCQ13952 458 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 MEP1AQ16819 746 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 SAXO2Q658L1 398 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 FAM91A1Q658Y4 838 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 ANGPTL8Q6UXH0 198 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 DLEU7Q6UYE1 221 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 NPSR1Q6W5P4 371 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 ARMC10Q8N2F6 343 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 PNPT1Q8TCS8 783 aaKnown RBP19.61■□□□□ 0.73
VPS29-206ENST00000549578 ZFP90Q8TF47 636 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 CMTM5Q96DZ9 223 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 NEURL3Q96EH8 262 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 SLC35G5Q96KT7 338 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 ZNF354BQ96LW1 612 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 BTBD9Q96Q07 612 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 SERHL2Q9H4I8 314 aa19.61■□□□□ 0.73
VPS29-206ENST00000549578 ZBTB20Q9HC78 741 aaPredicted RBP19.61■□□□□ 0.73
VPS29-206ENST00000549578 GPR55Q9Y2T6 319 aaPredicted RBP19.61■□□□□ 0.73
VPS29-206ENST00000549578 MKRN2OSH3BPM6 223 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 FAM87AP0C7U9 286 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 CT45A8P0DMV1 189 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 CT45A9P0DMV2 189 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 ACP2P11117 423 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 PPICP45877 212 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 PRIM2P49643 509 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 CT45A2Q5DJT8 189 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 COQ5Q5HYK3 327 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 ABHD17BQ5VST6 288 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 ISLR2Q6UXK2 745 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 SLC44A2Q8IWA5 706 aaPredicted RBP19.6■□□□□ 0.73
VPS29-206ENST00000549578 BEST3Q8N1M1 668 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 CDRT4Q8N9R6 151 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 SLC16A11Q8NCK7 471 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 SLC9A6Q92581 669 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 TP53INP1Q96A56 240 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 LCORQ96JN0 433 aaPredicted RBP19.6■□□□□ 0.73
VPS29-206ENST00000549578 RASL10BQ96S79 203 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 LMF2Q9BU23 707 aaKnown RBP19.6■□□□□ 0.73
VPS29-206ENST00000549578 ARL8BQ9NVJ2 186 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 STMN3Q9NZ72 180 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 FAF1Q9UNN5 650 aaPredicted RBP19.6■□□□□ 0.73
VPS29-206ENST00000549578 CPAMD8Q8IZJ3 1885 aa19.6■□□□□ 0.73
VPS29-206ENST00000549578 TRBV5-3A0A0A0MS03 114 aa19.59■□□□□ 0.73
VPS29-206ENST00000549578 NADKO95544 446 aaPredicted RBP19.59■□□□□ 0.73
VPS29-206ENST00000549578 DRD5P21918 477 aa19.59■□□□□ 0.73
VPS29-206ENST00000549578 PRDX6P30041 224 aa19.59■□□□□ 0.73
VPS29-206ENST00000549578 ZNHIT3Q15649 155 aaPredicted RBP19.59■□□□□ 0.73
VPS29-206ENST00000549578 RNF130Q86XS8 419 aa19.59■□□□□ 0.73
VPS29-206ENST00000549578 LGI4Q8N135 537 aa19.59■□□□□ 0.73
VPS29-206ENST00000549578 C17orf47Q8NEP4 570 aa19.59■□□□□ 0.73
VPS29-206ENST00000549578 TTC9Q92623 222 aa19.59■□□□□ 0.73
VPS29-206ENST00000549578 HOXB13Q92826 284 aaPredicted RBP19.59■□□□□ 0.73
VPS29-206ENST00000549578 LMF1Q96S06 567 aa19.59■□□□□ 0.73
VPS29-206ENST00000549578 ARHGAP9Q9BRR9 750 aa19.59■□□□□ 0.73
VPS29-206ENST00000549578 ACTRT3Q9BYD9 372 aa19.59■□□□□ 0.73
VPS29-206ENST00000549578 TPT1P8Q9HAU6 139 aa19.59■□□□□ 0.73
VPS29-206ENST00000549578 PCDHGA9Q9Y5G4 932 aaKnown RBP19.59■□□□□ 0.73
VPS29-206ENST00000549578 FRG2CA6NGY1 282 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 AIM2O14862 343 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 F10P00742 488 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 ALPPP05187 535 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 MATN1P21941 496 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 GABRA3P34903 492 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 MAP3K8P41279 467 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 CPA2P48052 419 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 DCAF7P61962 342 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 MFAP5Q13361 173 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 CAPRIN1Q14444 709 aaKnown RBP19.58■□□□□ 0.73
VPS29-206ENST00000549578 DUSP5Q16690 384 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 TRMT5Q32P41 509 aaKnown RBP19.58■□□□□ 0.73
VPS29-206ENST00000549578 PIGGQ5H8A4 983 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 CDC73Q6P1J9 531 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 TNFAIP8L2Q6P589 184 aaPredicted RBP19.58■□□□□ 0.73
VPS29-206ENST00000549578 ZCCHC12Q6PEW1 402 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 PRR22Q8IZ63 422 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 OR4N2Q8NGD1 307 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 OR5D16Q8NGK9 328 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 DNAJB8Q8NHS0 232 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 ABHD17AQ96GS6 310 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 SMAD5Q99717 465 aaKnown RBP19.58■□□□□ 0.73
VPS29-206ENST00000549578 SLC39A3Q9BRY0 314 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 ANKRD10Q9NXR5 420 aa19.58■□□□□ 0.73
VPS29-206ENST00000549578 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.58■□□□□ 0.73
VPS29-206ENST00000549578 YARS2Q9Y2Z4 477 aaKnown RBP19.58■□□□□ 0.73
VPS29-206ENST00000549578 K7EM74 188 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 FXYD1O00168 92 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 CLIC1O00299 241 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 UNC5CO95185 931 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 KRT75O95678 551 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 PDGFAP04085 211 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 ALOX5P09917 674 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 MAN2A2P49641 1150 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 SSR4P51571 173 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 RHDQ02161 417 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 COX20Q5RI15 118 aa19.57■□□□□ 0.72
VPS29-206ENST00000549578 EXOSC6Q5RKV6 272 aaKnown RBP19.57■□□□□ 0.72
VPS29-206ENST00000549578 ZNF468Q5VIY5 522 aaPredicted RBP19.57■□□□□ 0.72
VPS29-206ENST00000549578 TRPM8Q7Z2W7 1104 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms