RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 IFT88Q13099 833 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 CAPRIN1Q14444 709 aaKnown RBP11.12□□□□□ -0.63
DDX54-206ENST00000549271 C10orf62Q5T681 223 aaPredicted RBP11.12□□□□□ -0.63
DDX54-206ENST00000549271 TTC19Q6DKK2 380 aaPredicted RBP11.12□□□□□ -0.63
DDX54-206ENST00000549271 CYP20A1Q6UW02 462 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 RNF111Q6ZNA4 994 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 HIPK1Q86Z02 1210 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 METTL4Q8N3J2 472 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 OR10G3Q8NGC4 313 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 DOK4Q8TEW6 326 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 UBLCP1Q8WVY7 318 aaPredicted RBP11.12□□□□□ -0.63
DDX54-206ENST00000549271 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.12□□□□□ -0.632e-6■■■■■ 29
DDX54-206ENST00000549271 NTNG2Q96CW9 530 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 CCL19Q99731 98 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 MRPL1Q9BYD6 325 aaKnown RBP11.12□□□□□ -0.63
DDX54-206ENST00000549271 DCDC2Q9UHG0 476 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 ADAM29Q9UKF5 820 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 ERVK-19Q9WJR5 959 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 EIF3LQ9Y262 564 aaKnown RBP11.12□□□□□ -0.63
DDX54-206ENST00000549271 A0A1W2PS29 197 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 CAPN14A8MX76 684 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 EEF1E1-BLOC1S5C9J1V9 151 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 MANBAO00462 879 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 EEF1E1O43324 174 aaKnown RBP11.11□□□□□ -0.63
DDX54-206ENST00000549271 KLK1P06870 262 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 FPR1P21462 350 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 SLCO1A2P46721 670 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 PTH2RP49190 550 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 CRYZQ08257 329 aaKnown RBP11.11□□□□□ -0.63
DDX54-206ENST00000549271 GALNT1Q10472 559 aaPredicted RBP11.11□□□□□ -0.63
DDX54-206ENST00000549271 ZNF267Q14586 743 aaPredicted RBP11.11□□□□□ -0.63
DDX54-206ENST00000549271 RASA2Q15283 850 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 ACKR1Q16570 336 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 TCHHL1Q5QJ38 904 aaPredicted RBP11.11□□□□□ -0.63
DDX54-206ENST00000549271 PRAMEF20Q5VT98 475 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 NUDT13Q86X67 352 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 SLC22A9Q8IVM8 553 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 TAGAPQ8N103 731 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 CNPY4Q8N129 248 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 FAM13CQ8NE31 585 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 SELENOMQ8WWX9 145 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 RIT1Q92963 219 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 L3HYPDHQ96EM0 354 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 ZNF382Q96SR6 550 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 DOHHQ9BU89 302 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 PRDM14Q9GZV8 571 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 SLC6A15Q9H2J7 730 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 UBQLN3Q9H347 655 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 ELOVL6Q9H5J4 265 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 WDR41Q9HAD4 459 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 BRF2Q9HAW0 419 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 TEX10Q9NXF1 929 aaPredicted RBP11.11□□□□□ -0.63
DDX54-206ENST00000549271 SNX6Q9UNH7 406 aa11.11□□□□□ -0.63
DDX54-206ENST00000549271 TP53I11O14683 189 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 SIAH2O43255 324 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 OR10H2O60403 315 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 SOX30O94993 753 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 SNX4O95219 450 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 IL18BPO95998 194 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 PROCP04070 461 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 HPNP05981 417 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 NR2F6P10588 404 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 NID1P14543 1247 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 PAX1P15863 534 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 CHN1P15882 459 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 CTSSP25774 331 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 CRHR1P34998 444 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 OPRM1P35372 400 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 AGFG1P52594 562 aaKnown RBP11.1□□□□□ -0.63
DDX54-206ENST00000549271 VSNL1P62760 191 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 FUT7Q11130 342 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 DUSP8Q13202 625 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 RPS6KA2Q15349 733 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 SF3B4Q15427 424 aaKnown RBP eCLIP11.1□□□□□ -0.63
DDX54-206ENST00000549271 NHSL2Q5HYW2 709 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 NSUN5P2Q63ZY6 315 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 ZYG11AQ6WRX3 759 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 GPRIN3Q6ZVF9 776 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 COMMD6Q7Z4G1 85 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 PM20D2Q8IYS1 436 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 LIX1Q8N485 282 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 CDYL2Q8N8U2 506 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 C17orf47Q8NEP4 570 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 EPS8L3Q8TE67 593 aaKnown RBP11.1□□□□□ -0.63
DDX54-206ENST00000549271 HSPBAP1Q96EW2 488 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 ZNF597Q96LX8 424 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 GAL3ST4Q96RP7 486 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 HBEGFQ99075 208 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 TIMP4Q99727 224 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 ANGPTL4Q9BY76 406 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 C12orf65Q9H3J6 166 aaKnown RBP11.1□□□□□ -0.63
DDX54-206ENST00000549271 GSTO2Q9H4Y5 243 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 PPCSQ9HAB8 311 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 CXorf21Q9HAI6 301 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 GALNT8Q9NY28 637 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 AHSPQ9NZD4 102 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 CES1P1Q9UKY3 287 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 SLC12A4Q9UP95 1085 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 USF3Q68DE3 2245 aa11.1□□□□□ -0.63
DDX54-206ENST00000549271 EXPH5Q8NEV8 1989 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms