RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 ENTPD8Q5MY95 495 aa13.31□□□□□ -0.28
RAPGEF3-218ENST00000548919 CD300LDQ6UXZ3 194 aa13.31□□□□□ -0.28
RAPGEF3-218ENST00000548919 FAM20CQ8IXL6 584 aa13.31□□□□□ -0.28
RAPGEF3-218ENST00000548919 ZNF557Q8N988 423 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF3-218ENST00000548919 TMEM145Q8NBT3 493 aa13.31□□□□□ -0.28
RAPGEF3-218ENST00000548919 TEX47Q8TBZ9 253 aa13.31□□□□□ -0.28
RAPGEF3-218ENST00000548919 ZG16BQ96DA0 208 aa13.31□□□□□ -0.28
RAPGEF3-218ENST00000548919 FAM46AQ96IP4 442 aaKnown RBP13.31□□□□□ -0.28
RAPGEF3-218ENST00000548919 AMDHD1Q96NU7 426 aa13.31□□□□□ -0.28
RAPGEF3-218ENST00000548919 ATF6BQ99941 703 aa13.31□□□□□ -0.28
RAPGEF3-218ENST00000548919 AIF1LQ9BQI0 150 aa13.31□□□□□ -0.28
RAPGEF3-218ENST00000548919 ARHGAP9Q9BRR9 750 aa13.31□□□□□ -0.28
RAPGEF3-218ENST00000548919 RHBGQ9H310 441 aa13.31□□□□□ -0.28
RAPGEF3-218ENST00000548919 CLCA2Q9UQC9 943 aa13.31□□□□□ -0.28
RAPGEF3-218ENST00000548919 GSTK1Q9Y2Q3 226 aa13.31□□□□□ -0.28
RAPGEF3-218ENST00000548919 GPSM3Q9Y4H4 160 aa13.31□□□□□ -0.28
RAPGEF3-218ENST00000548919 A0A0X1KG70 313 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 CPSF4LA6NMK7 179 aaKnown RBP13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 FAM25AB3EWG3 89 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 FAM25CB3EWG5 89 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 FAM25GB3EWG6 89 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 NDUFS4O43181 175 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 LZTS3O60299 673 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 CPN2P22792 545 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 PPP2R1BP30154 601 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 NCBP2P52298 156 aaKnown RBP eCLIP13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 CHRNEQ04844 493 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 NUMA1Q14980 2115 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 NDUFAF5Q5TEU4 345 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 KIAA1161Q6NSJ0 714 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 SLC30A6Q6NXT4 461 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 SLC27A4Q6P1M0 643 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 ADCK2Q7Z695 626 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 PLA2G15Q8NCC3 412 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 TFGQ92734 400 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 C16orf58Q96GQ5 468 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 ZSWIM3Q96MP5 696 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 CITED4Q96RK1 184 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 DPH7Q9BTV6 452 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 IRF2BPLQ9H1B7 796 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 FGF20Q9NP95 211 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 NTNG1Q9Y2I2 539 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 GPR55Q9Y2T6 319 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 FAM240BA0A1B0GVZ2 78 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 ERAL1O75616 437 aaKnown RBP13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 RB1P06400 928 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 KELP23276 732 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 HOXD10P28358 340 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 PPP3R1P63098 170 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 NTHL1P78549 312 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 NUDT13Q86X67 352 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 MARCH9Q86YJ5 346 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 BBS1Q8NFJ9 593 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 ARRDC3Q96B67 414 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 PRRC1Q96M27 445 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 DPEP2Q9H4A9 486 aa13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 RBFOX1Q9NWB1 397 aaKnown RBP13.3□□□□□ -0.28
RAPGEF3-218ENST00000548919 NOTCH4Q99466 2003 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 FAM170BA6NMN3 283 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 TNFRSF10AO00220 468 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 KIAA0355O15063 1070 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 LYRM1O43325 122 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 MOSPD3O75425 235 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 UBXN7O94888 489 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 C8orf89P0DMQ9 161 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 LAG3P18627 525 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 HLA-DMAP28067 261 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 SLC1A3P43003 542 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 TAS2R41P59536 307 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 GNG2P59768 71 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 UBE3AQ05086 875 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 NDUFA9Q16795 377 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 WSCD2Q2TBF2 565 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 MINDY4Q4G0A6 757 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 LILRA6Q6PI73 481 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 C12orf40Q86WS4 652 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 ZNF485Q8NCK3 441 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 PXYLP1Q8TE99 480 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 KIAA1143Q96AT1 154 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 PPP1R16AQ96I34 528 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 MCUBQ9NWR8 336 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 ISM1B1AKI9 464 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 ZNF780AO75290 641 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 FGF18O76093 207 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 HMGN2P05204 90 aaKnown RBP13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 GNSP15586 552 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 CDH11P55287 796 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 DUSP2Q05923 314 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 TCEAL5Q5H9L2 206 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 KIAA0907Q7Z7F0 614 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 TCTE3Q8IZS6 198 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 NEIL3Q8TAT5 605 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 ZFAND1Q8TCF1 268 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 OTULINQ96BN8 352 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 SOSTQ9BQB4 213 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 WACQ9BTA9 647 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 AICDAQ9GZX7 198 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 KLHL31Q9H511 634 aa13.29□□□□□ -0.28
RAPGEF3-218ENST00000548919 GALNT9Q9HCQ5 603 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms