RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 RNF6Q9Y252 685 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 CCDC168Q8NDH2 2452 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 CCDC88CQ9P219 2028 aa3.88□□□□□ -1.79
CBX5-203ENST00000547872 PCM1Q15154 2024 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 ZNF469Q96JG9 3925 aaPredicted RBP3.87□□□□□ -1.79
CBX5-203ENST00000547872 NAV3Q8IVL0 2385 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 NSG1A0A0A6YYJ2 146 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 AKR1B15C9JRZ8 316 aaPredicted RBP3.87□□□□□ -1.79
CBX5-203ENST00000547872 PSMD11O00231 422 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 PES1O00541 588 aaKnown RBP3.87□□□□□ -1.79
CBX5-203ENST00000547872 CLGNO14967 610 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 KMOO15229 486 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 PHF1O43189 567 aaPredicted RBP3.87□□□□□ -1.79
CBX5-203ENST00000547872 CTAG2O75638 210 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 CDK14O94921 469 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 KDM4BO94953 1096 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 YEATS4O95619 227 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 PMS2P2O95744 297 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 SPARCP09486 303 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 VCLP18206 1134 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 MAOAP21397 527 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 MCM3P25205 808 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 HADHAP40939 763 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 NSG1P42857 185 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 CCR9P51686 369 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 NDUFA8P51970 172 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 STC1P52823 247 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 YBEYP58557 167 aaPredicted RBP3.87□□□□□ -1.79
CBX5-203ENST00000547872 DCAF7P61962 342 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 RPL7AP62424 266 aaKnown RBP3.87□□□□□ -1.79
CBX5-203ENST00000547872 FKBP3Q00688 224 aaKnown RBP3.87□□□□□ -1.79
CBX5-203ENST00000547872 OC90Q02509 493 aaPredicted RBP3.87□□□□□ -1.79
CBX5-203ENST00000547872 OASLQ15646 514 aaKnown RBP3.87□□□□□ -1.79
CBX5-203ENST00000547872 CCNG2Q16589 344 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 CA9Q16790 459 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 DPCR1Q3MIW9 517 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 NKAIN1Q4KMZ8 207 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 PAPPA-AS1Q5QFB9 102 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 C6orf141Q5SZD1 244 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 MFSD4BQ5TF39 518 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 GGNBP1Q5YKI7 109 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 KCTD18Q6PI47 426 aaPredicted RBP3.87□□□□□ -1.79
CBX5-203ENST00000547872 KMT5CQ86Y97 462 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 ZGRF1Q86YA3 2104 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 CLYBLQ8N0X4 340 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 NDUFAF2Q8N183 169 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 SPATA6LQ8N4H0 392 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 MARVELD2Q8N4S9 558 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 ATPAF2Q8N5M1 289 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 MSANTD4Q8NCY6 345 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 TMEM158Q8WZ71 300 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 SLCO2A1Q92959 643 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 GPR137Q96N19 417 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 TTC25Q96NG3 672 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 PIP5K1AQ99755 562 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 HGH1Q9BTY7 390 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 LRRC19Q9H756 370 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 PPP1R3EQ9H7J1 279 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 UCK1Q9HA47 277 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 PLSCR4Q9NRQ2 329 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 ZNF224Q9NZL3 707 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 ABI3Q9P2A4 366 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 STOX2Q9P2F5 926 aaPredicted RBP3.87□□□□□ -1.79
CBX5-203ENST00000547872 KCNN3Q9UGI6 736 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 PCSK1NQ9UHG2 260 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 MKLN1Q9UL63 735 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 VDAC3Q9Y277 283 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 KLHL20Q9Y2M5 609 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 MRPS2Q9Y399 296 aaKnown RBP3.87□□□□□ -1.79
CBX5-203ENST00000547872 CEPT1Q9Y6K0 416 aa3.87□□□□□ -1.79
CBX5-203ENST00000547872 PRRC2AP48634 2157 aaKnown RBP3.87□□□□□ -1.79
CBX5-203ENST00000547872 ANKHD1Q8IWZ3 2542 aaKnown RBP3.87□□□□□ -1.79
CBX5-203ENST00000547872 NCOA6Q14686 2063 aaPredicted RBP3.86□□□□□ -1.79
CBX5-203ENST00000547872 MYO7BQ6PIF6 2116 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 IGHV3-20A0A0C4DH32 117 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 A0A0J9YYE9 177 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 A0A1B0GTH9 108 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 MAGEA13PA6NCF6 341 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 OR5H15A6NDH6 313 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 J3KRW8 73 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 TTI1O43156 1089 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 SOCS5O75159 536 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 TOXO94900 526 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 TRBC1P01850 177 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 SNRNP70P08621 437 aaKnown RBP3.86□□□□□ -1.79
CBX5-203ENST00000547872 SLC35G4P0C7Q5 338 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 MMP11P24347 488 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 EEF1DP29692 281 aaKnown RBP3.86□□□□□ -1.79
CBX5-203ENST00000547872 SPINT3P49223 89 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 RAB28P51157 221 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 SEC61BP60468 96 aaKnown RBP3.86□□□□□ -1.79
CBX5-203ENST00000547872 OLR1P78380 273 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 POU3F1Q03052 451 aaPredicted RBP3.86□□□□□ -1.79
CBX5-203ENST00000547872 ENPEPQ07075 957 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 IL10RBQ08334 325 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 PRKG2Q13237 762 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 DCTN2Q13561 401 aaKnown RBP3.86□□□□□ -1.79
CBX5-203ENST00000547872 FASTKQ14296 549 aaKnown RBP3.86□□□□□ -1.79
CBX5-203ENST00000547872 INAQ16352 499 aa3.86□□□□□ -1.79
CBX5-203ENST00000547872 HENMT1Q5T8I9 393 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms