RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 OR52E8Q6IFG1 317 aa12.15□□□□□ -0.46
CCDC59-202ENST00000547758 GRHL2Q6ISB3 625 aa12.15□□□□□ -0.46
CCDC59-202ENST00000547758 CYP20A1Q6UW02 462 aa12.15□□□□□ -0.46
CCDC59-202ENST00000547758 TRIM58Q8NG06 486 aa12.15□□□□□ -0.46
CCDC59-202ENST00000547758 OR7G1Q8NGA0 311 aa12.15□□□□□ -0.46
CCDC59-202ENST00000547758 OMA1Q96E52 524 aa12.15□□□□□ -0.46
CCDC59-202ENST00000547758 MS4A14Q96JA4 679 aa12.15□□□□□ -0.46
CCDC59-202ENST00000547758 CD244Q9BZW8 370 aa12.15□□□□□ -0.46
CCDC59-202ENST00000547758 KLHL4Q9C0H6 718 aa12.15□□□□□ -0.46
CCDC59-202ENST00000547758 EHD3Q9NZN3 535 aa12.15□□□□□ -0.46
CCDC59-202ENST00000547758 FBXL2Q9UKC9 423 aa12.15□□□□□ -0.46
CCDC59-202ENST00000547758 SVEP1Q4LDE5 3571 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 FRG2CA6NGY1 282 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 EMC8O43402 210 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 KLF4O43474 513 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 UGT2B11O75310 529 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 S100BP04271 92 aaPredicted RBP12.14□□□□□ -0.47
CCDC59-202ENST00000547758 THBDP07204 575 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 CCDC166P0CW27 439 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 CD8BP10966 210 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 CD1DP15813 335 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 TBXA2RP21731 343 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 TCEA1P23193 301 aaKnown RBP12.14□□□□□ -0.47
CCDC59-202ENST00000547758 BSGP35613 385 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 PIK3CBP42338 1070 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 SLC12A2P55011 1212 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 RPS4XP62701 263 aaKnown RBP12.14□□□□□ -0.47
CCDC59-202ENST00000547758 MGAT5Q09328 741 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 FRG1Q14331 258 aaKnown RBP12.14□□□□□ -0.47
CCDC59-202ENST00000547758 PPP1R7Q15435 360 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 BCL2A1Q16548 175 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 PLCZ1Q86YW0 608 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 ZNF610Q8N9Z0 462 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 EXT2Q93063 718 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 DTNBP1Q96EV8 351 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 MTERF1Q99551 399 aaKnown RBP12.14□□□□□ -0.47
CCDC59-202ENST00000547758 ITPAQ9BY32 194 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 RHOJQ9H4E5 214 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 DDX31Q9H8H2 851 aaKnown RBP12.14□□□□□ -0.47
CCDC59-202ENST00000547758 ASIC3Q9UHC3 531 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 DKKL1Q9UK85 242 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 LAMP3Q9UQV4 416 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 CADP27708 2225 aa12.14□□□□□ -0.47
CCDC59-202ENST00000547758 A8MV72 311 aaPredicted RBP12.13□□□□□ -0.47
CCDC59-202ENST00000547758 PGRMC2O15173 223 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 ACOX3O15254 700 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 FAM157CP0CG43 387 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 SNRPBP14678 240 aaKnown RBP12.13□□□□□ -0.47
CCDC59-202ENST00000547758 PPP3CBP16298 524 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 EPB42P16452 691 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 S1PR1P21453 382 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 NT5EP21589 574 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 IDUAP35475 653 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 FNTAP49354 379 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 ATP6V0D1P61421 351 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 HMGCS1Q01581 520 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 FGFBP1Q14512 234 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 MILR1Q7Z6M3 343 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 UBQLNLQ8IYU4 475 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 PDIK1LQ8N165 341 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 FIG4Q92562 907 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 HPS1Q92902 700 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 ZBED6CLQ96FA7 236 aaPredicted RBP12.13□□□□□ -0.47
CCDC59-202ENST00000547758 TRMT61AQ96FX7 289 aaKnown RBP12.13□□□□□ -0.47
CCDC59-202ENST00000547758 PLPPR2Q96GM1 343 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 LCORQ96JN0 433 aaPredicted RBP12.13□□□□□ -0.47
CCDC59-202ENST00000547758 TMEM204Q9BSN7 226 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 RNF122Q9H9V4 155 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 PROCRQ9UNN8 238 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 CFL2Q9Y281 166 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 MRPS18CQ9Y3D5 142 aaKnown RBP12.13□□□□□ -0.47
CCDC59-202ENST00000547758 TEX264Q9Y6I9 313 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 ALPK2Q86TB3 2170 aa12.13□□□□□ -0.47
CCDC59-202ENST00000547758 K7EPI3 171 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 PEPDP12955 493 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 CPMP14384 443 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 PTX3P26022 381 aaPredicted RBP12.12□□□□□ -0.47
CCDC59-202ENST00000547758 XKP51811 444 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 B3GALT5-AS1P59052 145 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 PHEXP78562 749 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 POU4F1Q01851 419 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 OCRLQ01968 901 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 EXOC3L2Q2M3D2 409 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 KRTAP24-1Q3LI83 254 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 ZNF662Q6ZS27 426 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 NUDT13Q86X67 352 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 MYLK4Q86YV6 388 aaPredicted RBP12.12□□□□□ -0.47
CCDC59-202ENST00000547758 SPC24Q8NBT2 197 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 OR4K14Q8NGD5 310 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 AKAP1Q92667 903 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC59-202ENST00000547758 REPS1Q96D71 796 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 LRRC39Q96DD0 335 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 NAP1L3Q99457 506 aaPredicted RBP12.12□□□□□ -0.47
CCDC59-202ENST00000547758 MCMBPQ9BTE3 642 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 CAB39LQ9H9S4 337 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 OPTCQ9UBM4 332 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 BCAP29Q9UHQ4 241 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 TSC22D4Q9Y3Q8 395 aa12.12□□□□□ -0.47
CCDC59-202ENST00000547758 EFCAB8A8MWE9 144 aa12.11□□□□□ -0.47
CCDC59-202ENST00000547758 OVOL3O00110 214 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms