RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 AMBNQ9NP70 447 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 KRCC1Q9NPI7 259 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-225ENST00000545920 WASH6PQ9NQA3 447 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 INPP5EQ9NRR6 644 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 ACOXLQ9NUZ1 547 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 TXNL4BQ9NX01 149 aaKnown RBP6.11□□□□□ -1.43
SNHG1-225ENST00000545920 ERVK13-1Q9NX77 482 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 EMC3Q9P0I2 261 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 COPZ2Q9P299 210 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 CFAP97Q9P2B7 532 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 NOX1Q9Y5S8 564 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 SNX8Q9Y5X2 465 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 RNF215Q9Y6U7 377 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 A0A0G2JPF8 293 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 A0A1B0GTQ1 180 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 A0A1W2PQ45 241 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-225ENST00000545920 A0A1W2PQL4 384 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-225ENST00000545920 A0A1W2PQY0 241 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 PRAMEF27A3QJZ7 478 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 KRT87PA6NCN2 255 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 PRAMEF25A6NGN4 478 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 KDM4EB2RXH2 506 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-225ENST00000545920 HNRNPCL2B2RXH8 293 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 B4DXG7 233 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 GPR89AB7ZAQ6 455 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 HNRNPCL3B7ZW38 293 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 H3BN98 237 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 SLC9A3R1O14745 358 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-225ENST00000545920 TSPAN6O43657 245 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 EFCAB14O75071 495 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 NME6O75414 186 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-225ENST00000545920 CDRT1O95170 752 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 AGR2O95994 175 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 FGBP02675 491 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 OPN1SWP03999 348 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 CKMP06732 381 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 HBQ1P09105 142 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 CSF3P09919 207 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 GPR89BP0CG08 455 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 HNRNPCL4P0DMR1 293 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 CTSAP10619 480 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 CD70P32970 193 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 SOAT1P35610 550 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 MMP12P39900 470 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 STAT5AP42229 794 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 TSFMP43897 325 aaKnown RBP6.1□□□□□ -1.43
SNHG1-225ENST00000545920 OR1E2P47887 323 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 CRISP3P54108 245 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 MANFP55145 182 aaKnown RBP6.1□□□□□ -1.43
SNHG1-225ENST00000545920 CLDN20P56880 219 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 CYP4F2P78329 520 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 SHC2P98077 582 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 ID3Q02535 119 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 TAP2Q03519 686 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 PRKCZQ05513 592 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 DPTQ07507 201 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 FAPQ12884 760 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 TMEM115Q12893 351 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-225ENST00000545920 MAB21L1Q13394 359 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 ADAM15Q13444 863 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 EFR3AQ14156 821 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 DOC2BQ14184 412 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 PUM1Q14671 1186 aaKnown RBP eCLIP6.1□□□□□ -1.43
SNHG1-225ENST00000545920 GPR19Q15760 415 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 TRIM60Q495X7 471 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 TMEM35AQ53FP2 167 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 SYT14P1Q58G82 188 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 PRAMEF14Q5SWL7 426 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 PRAMEF13Q5VWM6 474 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 KHDRBS2Q5VWX1 349 aaKnown RBP6.1□□□□□ -1.43
SNHG1-225ENST00000545920 CST9Q5W186 159 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 SLC27A4Q6P1M0 643 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 SERPINA13PQ6UXR4 307 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 Q6ZPB1 254 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-225ENST00000545920 RASSF6Q6ZTQ3 369 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 NUDT13Q86X67 352 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 FAM129CQ86XR2 697 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 GID4Q8IVV7 300 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 DCUN1D3Q8IWE4 304 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 SLC7A5P1Q8MH63 180 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 SLC39A11Q8N1S5 342 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 FAM109AQ8N4B1 249 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 RAB42Q8N4Z0 105 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 TBC1D19Q8N5T2 526 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 RASGEF1AQ8N9B8 481 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 POGLUT1Q8NBL1 392 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 GPR156Q8NFN8 814 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 OR4K1Q8NGD4 311 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 OR56A1Q8NGH5 318 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 OR52I1Q8NGK6 324 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 OR2A12Q8NGT7 310 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 TEX47Q8TBZ9 253 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 SLC38A5Q8WUX1 472 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 BCL7CQ8WUZ0 217 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-225ENST00000545920 SMG7Q92540 1137 aaKnown RBP6.1□□□□□ -1.43
SNHG1-225ENST00000545920 OSTF1Q92882 214 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 FGF11Q92914 225 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 OTULINQ96BN8 352 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 TMEM19Q96HH6 336 aa6.1□□□□□ -1.43
SNHG1-225ENST00000545920 RADILQ96JH8 1075 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms