RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 ITFG2Q969R8 447 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 MAELQ96JY0 434 aaKnown RBP11.89□□□□□ -0.51
COL4A6-209ENST00000545689 VAPAQ9P0L0 249 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 FARSAQ9Y285 508 aaKnown RBP11.89□□□□□ -0.51
COL4A6-209ENST00000545689 MYH15Q9Y2K3 1946 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 GPR4P46093 362 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 APOFQ13790 326 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 ZNF691Q5VV52 312 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 MAMDC2Q7Z304 686 aaPredicted RBP11.89□□□□□ -0.51
COL4A6-209ENST00000545689 ZNF619Q8N2I2 560 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 TMEM130Q8N3G9 435 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 CHDHQ8NE62 594 aaPredicted RBP11.89□□□□□ -0.51
COL4A6-209ENST00000545689 ANKK1Q8NFD2 765 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 ZNF296Q8WUU4 475 aaPredicted RBP11.89□□□□□ -0.51
COL4A6-209ENST00000545689 SH3YL1Q96HL8 342 aaPredicted RBP11.89□□□□□ -0.51
COL4A6-209ENST00000545689 NEDD4LQ96PU5 975 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 CEPT1Q9Y6K0 416 aa11.89□□□□□ -0.51
COL4A6-209ENST00000545689 ZSCAN5BA6NJL1 495 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 CD8B2A6NJW9 211 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 BCAS1O75363 584 aaPredicted RBP11.88□□□□□ -0.51
COL4A6-209ENST00000545689 CLEC3AO75596 197 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 UPK1BO75841 260 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 TFPTP0C1Z6 253 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 CD8BP10966 210 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 ZMYND11Q15326 602 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 GRK1Q15835 563 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.88□□□□□ -0.51
COL4A6-209ENST00000545689 HACD4Q5VWC8 232 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 PGM2L1Q6PCE3 622 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 OR2L2Q8NH16 312 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 GAL3ST3Q96A11 431 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 PRRC1Q96M27 445 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 ZFYVE21Q9BQ24 234 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 RTCAO00442 366 aaKnown RBP11.88□□□□□ -0.51
COL4A6-209ENST00000545689 ZNF81P51508 661 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 RAB40BQ12829 278 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 MFSD13AQ14CX5 517 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 NTRK2Q16620 822 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 ZNF765Q7L2R6 523 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 DGLUCYQ7Z3D6 616 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 PIANPQ8IYJ0 282 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 SPARTQ8N0X7 666 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 SLC22A8Q8TCC7 542 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 DTD2Q96FN9 168 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 NAA11Q9BSU3 229 aaPredicted RBP11.88□□□□□ -0.51
COL4A6-209ENST00000545689 ATG5Q9H1Y0 275 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 KCNK12Q9HB15 430 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 PPP4R1LQ9P1A2 415 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 A8MU76 341 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 CYP17A1P05093 508 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 NUDT1P36639 197 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 EIF1AXP47813 144 aaKnown RBP11.88□□□□□ -0.51
COL4A6-209ENST00000545689 SERTAD2Q14140 314 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 GRM7Q14831 915 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 C3orf58Q8NDZ4 430 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 TREM1Q9NP99 234 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 POLE4Q9NR33 117 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 INPP5EQ9NRR6 644 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 HPF1Q9NWY4 346 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 NUP50Q9UKX7 468 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 MYH10P35580 1976 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 CDK1P06493 297 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 AOAHP28039 575 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 NAA10P41227 235 aaPredicted RBP11.88□□□□□ -0.51
COL4A6-209ENST00000545689 SLC18B1Q6NT16 456 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 SLC7A13Q8TCU3 470 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 ADAMTS19Q8TE59 1207 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 MAL2Q969L2 176 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 KATNBL1Q9H079 304 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 NANSQ9NR45 359 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 EPHA6Q9UF33 1036 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 CYP8B1Q9UNU6 501 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 C13orf42A0A1B0GVH6 325 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 SMIM30A4D0T7 59 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 H3BUI4 141 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 PNMTP11086 282 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 SOX2P48431 317 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 PRLHRP49683 370 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 CEBPGP53567 150 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 KIR2DS3Q14952 304 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 ZNF551Q7Z340 670 aaPredicted RBP11.88□□□□□ -0.51
COL4A6-209ENST00000545689 TMPRSS12Q86WS5 348 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 NRMQ8IXM6 262 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 Q8N9G6 341 aaPredicted RBP11.88□□□□□ -0.51
COL4A6-209ENST00000545689 FAM46BQ96A09 425 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 HYLS1Q96M11 299 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 RNF38Q9H0F5 515 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 ABCG5Q9H222 651 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 IL21RQ9HBE5 538 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 ADAM29Q9UKF5 820 aa11.88□□□□□ -0.51
COL4A6-209ENST00000545689 SLC35F4A4IF30 521 aa11.87□□□□□ -0.51
COL4A6-209ENST00000545689 NAP1L6A6NFF2 107 aa11.87□□□□□ -0.51
COL4A6-209ENST00000545689 SORBS2O94875 1100 aaKnown RBP11.87□□□□□ -0.51
COL4A6-209ENST00000545689 SLC6A8P48029 635 aa11.87□□□□□ -0.51
COL4A6-209ENST00000545689 ACTBP60709 375 aa11.87□□□□□ -0.51
COL4A6-209ENST00000545689 ACTG1P63261 375 aa11.87□□□□□ -0.51
COL4A6-209ENST00000545689 SNTB2Q13425 540 aaKnown RBP11.87□□□□□ -0.51
COL4A6-209ENST00000545689 ALG10BQ5I7T1 473 aa11.87□□□□□ -0.51
COL4A6-209ENST00000545689 TRNP1Q6NT89 227 aa11.87□□□□□ -0.51
COL4A6-209ENST00000545689 NT5C3BQ969T7 300 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms