RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 DPEP3Q9H4B8 488 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 MRPL17Q9NRX2 175 aaKnown RBP3.13□□□□□ -1.91
SNHG1-224ENST00000545688 MIS18AQ9NYP9 233 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 TTLL3Q9Y4R7 772 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 PSME4Q14997 1843 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 MYO3BQ8WXR4 1341 aa3.13□□□□□ -1.91
SNHG1-224ENST00000545688 LAMB4A4D0S4 1761 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 WDFY4Q6ZS81 3184 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 CCL15-CCL14A0A0B4J2E2 113 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 GTPBP10A4D1E9 387 aaKnown RBP3.12□□□□□ -1.91
SNHG1-224ENST00000545688 M0R296 226 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 CSDE1O75534 798 aaKnown RBP3.12□□□□□ -1.91
SNHG1-224ENST00000545688 LETM1O95202 739 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-224ENST00000545688 ZFYP08048 801 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-224ENST00000545688 CD1EP15812 388 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 PPP2R1BP30154 601 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 PRKAR2BP31323 418 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 MAGEA9P43362 315 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 NDST1P52848 882 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 CCL15Q16663 113 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 CAPN13Q6MZZ7 669 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-224ENST00000545688 IGFL2Q6UWQ7 119 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 COPS6Q7L5N1 327 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 CERS5Q8N5B7 392 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-224ENST00000545688 TCP11Q8WWU5 503 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 OPTNQ96CV9 577 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 RAB40CQ96S21 281 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 GPR173Q9NS66 373 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 CHD7Q9P2D1 2997 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 MLXQ9UH92 298 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 TRMT112Q9UI30 125 aaKnown RBP3.12□□□□□ -1.91
SNHG1-224ENST00000545688 ABCG2Q9UNQ0 655 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 MED23Q9ULK4 1368 aa3.12□□□□□ -1.91
SNHG1-224ENST00000545688 CFAP54Q96N23 3096 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 ALPK3Q96L96 1907 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 DDX60Q8IY21 1712 aaKnown RBP3.11□□□□□ -1.91
SNHG1-224ENST00000545688 DCHS1Q96JQ0 3298 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 LAMB2P55268 1798 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 IGHV3-35A0A0C4DH35 117 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 ARHGEF37A1IGU5 675 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 KBTBD13C9JR72 458 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 CCSO14618 274 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 CTDSPLO15194 276 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 UFL1O94874 794 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 LDHCP07864 332 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 ZNF32P17041 273 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 GLRA1P23415 457 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 HOXD10P28358 340 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 FKBP1AP62942 108 aaKnown RBP3.11□□□□□ -1.91
SNHG1-224ENST00000545688 VGLL4Q14135 290 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 EMC2Q15006 297 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 GCNT7Q6ZNI0 430 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 ANKRD23Q86SG2 305 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 C4orf19Q8IY42 314 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 MRPL24Q96A35 216 aaKnown RBP3.11□□□□□ -1.91
SNHG1-224ENST00000545688 C16orf58Q96GQ5 468 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 PCED1BQ96HM7 432 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 RAB3IPQ96QF0 476 aaPredicted RBP3.11□□□□□ -1.91
SNHG1-224ENST00000545688 THUMPD2Q9BTF0 503 aaKnown RBP3.11□□□□□ -1.91
SNHG1-224ENST00000545688 COA1Q9GZY4 146 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 IKZF5Q9H5V7 419 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 IL1RL2Q9HB29 575 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 ELL3Q9HB65 397 aaPredicted RBP3.11□□□□□ -1.91
SNHG1-224ENST00000545688 FAM212BQ9NTI7 297 aaPredicted RBP3.11□□□□□ -1.91
SNHG1-224ENST00000545688 KNSTRNQ9Y448 316 aa3.11□□□□□ -1.91
SNHG1-224ENST00000545688 RAI1Q7Z5J4 1906 aaPredicted RBP3.11□□□□□ -1.91
SNHG1-224ENST00000545688 CHD9Q3L8U1 2897 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 C5orf42Q9H799 3197 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 USP34Q70CQ2 3546 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 ZSWIM8A7E2V4 1837 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 REV3LO60673 3130 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 EPOPA6NHQ4 379 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 KIAA0513O60268 411 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 RLN1P04808 185 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 HOXC4P09017 264 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-224ENST00000545688 OR1D2P34982 312 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 IER3P46695 156 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 CKAP4Q07065 602 aaKnown RBP3.1□□□□□ -1.91
SNHG1-224ENST00000545688 SLC3A1Q07837 685 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 MFGE8Q08431 387 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-224ENST00000545688 PPIL2Q13356 520 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 PSMD6Q15008 389 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 ODF2Q5BJF6 829 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 TRAT1Q6PIZ9 186 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 SIGLEC15Q6ZMC9 328 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 SLFN11Q7Z7L1 901 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 PCGF5Q86SE9 256 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 ERO1BQ86YB8 467 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 ARL14Q8N4G2 192 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 GVQW1Q8N7I0 195 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 CCDC197Q8NCU1 140 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 OR4F5Q8NH21 305 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 RAET1EQ8TD07 263 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 CKAP2Q8WWK9 683 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 FAF2Q96CS3 445 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 ZNF799Q96GE5 643 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 MAGEB18Q96M61 343 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 DEFB118Q96PH6 123 aa3.1□□□□□ -1.91
SNHG1-224ENST00000545688 PLEKHF1Q96S99 279 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms