RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 PALMDQ9NP74 551 aa3.53□□□□□ -1.84
SNHG1-222ENST00000545308 CENPMQ9NSP4 180 aa3.53□□□□□ -1.84
SNHG1-222ENST00000545308 AATFQ9NY61 560 aaKnown RBP eCLIP3.53□□□□□ -1.841e-323■□□□□ 9
SNHG1-222ENST00000545308 VPS54Q9P1Q0 977 aa3.53□□□□□ -1.84
SNHG1-222ENST00000545308 MGAT4BQ9UQ53 548 aa3.53□□□□□ -1.84
SNHG1-222ENST00000545308 TTC28Q96AY4 2481 aa3.53□□□□□ -1.84
SNHG1-222ENST00000545308 LAMA3Q16787 3333 aa3.53□□□□□ -1.84
SNHG1-222ENST00000545308 VCANP13611 3396 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 hCG_38984A0A1B0GV85 526 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 SLC1A7O00341 560 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 ACOT8O14734 319 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 CSO75390 466 aaKnown RBP3.52□□□□□ -1.85
SNHG1-222ENST00000545308 VPS26AO75436 327 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 AP2A2O94973 939 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 ANGPTL1O95841 491 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 APRTP07741 180 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 HIST1H2AGP0C0S8 130 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-222ENST00000545308 PRKAR1AP10644 381 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 C4BPBP20851 252 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 TIMP3P35625 211 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 SOX6P35712 828 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 IFNAR2P48551 515 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 HNMTP50135 292 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 DLX5P56178 289 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 RIPK4P57078 832 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 HSF2Q03933 536 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 DRP2Q13474 957 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 BTG3Q14201 252 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-222ENST00000545308 EFTUD2Q15029 972 aaKnown RBP eCLIP3.52□□□□□ -1.853e-45■■■■■ 30.8
SNHG1-222ENST00000545308 CLPPQ16740 277 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-222ENST00000545308 ZSWIM7Q19AV6 140 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 CAVIN4Q5BKX8 364 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 MFSD14CQ5VZR4 134 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 FAM53AQ6NSI3 398 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-222ENST00000545308 SLC26A9Q7LBE3 791 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 ERASQ7Z444 233 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 PTAR1Q7Z6K3 402 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-222ENST00000545308 C17orf64Q86WR6 236 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-222ENST00000545308 SLC22A15Q8IZD6 547 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 TMEM178AQ8NBL3 297 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 RELL2Q8NC24 303 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-222ENST00000545308 OR2T34Q8NGX1 318 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 C8orf46Q8TAG6 207 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 SMAP2Q8WU79 429 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-222ENST00000545308 FAM151AQ8WW52 585 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 ZNF606Q8WXB4 792 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 HIST1H2ACQ93077 130 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 CCDC51Q96ER9 411 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 ZNF486Q96H40 463 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-222ENST00000545308 TXN2Q99757 166 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 PAPOLGQ9BWT3 736 aaKnown RBP3.52□□□□□ -1.85
SNHG1-222ENST00000545308 MMP28Q9H239 520 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 C3orf14Q9HBI5 128 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 VAT1LQ9HCJ6 419 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 ZNF334Q9HCZ1 680 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-222ENST00000545308 LHX3Q9UBR4 397 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 LAMP5Q9UJQ1 280 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 DUSP12Q9UNI6 340 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 MFHAS1Q9Y4C4 1052 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 ANGPTL3Q9Y5C1 460 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 SELENOKQ9Y6D0 94 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 PIEZO1Q92508 2521 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 OTOFQ9HC10 1997 aa3.52□□□□□ -1.85
SNHG1-222ENST00000545308 DDX60LQ5H9U9 1706 aaKnown RBP3.52□□□□□ -1.85
SNHG1-222ENST00000545308 ZNFX1Q9P2E3 1918 aaKnown RBP3.52□□□□□ -1.85
SNHG1-222ENST00000545308 SPEF2Q9C093 1822 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 ARAP2Q8WZ64 1704 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 IGHV4-4A0A075B6R2 117 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 A0A1B0GUL7 405 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 FAM230AA0A1W2PPH8 454 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 A8MU76 341 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 PDXKO00764 312 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 TLX2O43763 284 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-222ENST00000545308 FGF19O95750 216 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 PAICSP22234 425 aaKnown RBP3.51□□□□□ -1.85
SNHG1-222ENST00000545308 ADRA1AP35348 466 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 ALDH3B1P43353 468 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 ACADSBP45954 432 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 NPY2RP49146 381 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 NUMBP49757 651 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 FHITP49789 147 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 CCNA1P78396 465 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 HNRNPDQ14103 355 aaKnown RBP3.51□□□□□ -1.85
SNHG1-222ENST00000545308 SHHQ15465 462 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 ZRSR1Q15695 479 aaKnown RBP3.51□□□□□ -1.85
SNHG1-222ENST00000545308 TAB1Q15750 504 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 CCDC57Q2TAC2 916 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 ZNF718Q3SXZ3 478 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 ZNF672Q499Z4 452 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-222ENST00000545308 FAM76BQ5HYJ3 339 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 DCAF12Q5T6F0 453 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 Q71RC1 249 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-222ENST00000545308 ZER1Q7Z7L7 766 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 GRAMD2AQ8IUY3 354 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 MISPQ8IVT2 679 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 DENND6BQ8NEG7 585 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 OR10V1Q8NGI7 309 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 FBXO30Q8TB52 745 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 CHPT1Q8WUD6 406 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms