RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PSD4Q8NDX1 1056 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 OR7G1Q8NGA0 311 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 PPP1R14CQ8TAE6 165 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 DOK4Q8TEW6 326 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 C16orf78Q8WTQ4 265 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 SSC4DQ8WTU2 575 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 GPR137Q96N19 417 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 GAL3ST4Q96RP7 486 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 SPATA9Q9BWV2 254 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 BRINP2Q9C0B6 783 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 STMN4Q9H169 189 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-224ENST00000544990 OR10A5Q9H207 317 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 SACM1LQ9NTJ5 587 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 EHD3Q9NZN3 535 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 ENTPD4Q9Y227 616 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 FIS1Q9Y3D6 152 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 TENM4Q6N022 2769 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 GTF3C1Q12789 2109 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 A0A1W2PS29 197 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 NPIPA5E9PKD4 350 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 ACOT7O00154 380 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 TFECO14948 347 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-224ENST00000544990 TM9SF1O15321 606 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 ASNA1O43681 348 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 TYROBPO43914 113 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 SEMA7AO75326 666 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 BPGMP07738 259 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 STSP08842 583 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 CT62P0C5K7 136 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 CREB1P16220 341 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 PRPH2P23942 346 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 SSTR4P31391 388 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 MPIP34949 423 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 TMED10P49755 219 aaKnown RBP6.8□□□□□ -1.32
CPSF7-224ENST00000544990 NR0B1P51843 470 aaKnown RBP6.8□□□□□ -1.32
CPSF7-224ENST00000544990 NRG3P56975 720 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 KCNK10P57789 538 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 GPR85P60893 370 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 PLGLB1Q02325 96 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 EBPQ15125 230 aaKnown RBP6.8□□□□□ -1.32
CPSF7-224ENST00000544990 PRICKLE4Q2TBC4 344 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 ARL13AQ5H913 290 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-224ENST00000544990 FAM219BQ5XKK7 198 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 SLC22A10Q63ZE4 541 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 NOXRED1Q6NXP6 359 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 POMZP3Q6PJE2 187 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 LRIG3Q6UXM1 1119 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 RGS9BPQ6ZS82 235 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 RNF165Q6ZSG1 346 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 FAM47EQ6ZV65 393 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 SPATC1Q76KD6 591 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 EXOC3L1Q86VI1 746 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 DDIASQ8IXT1 998 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 MMP21Q8N119 569 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 GHDCQ8N2G8 530 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 LILRB2Q8N423 598 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 ZFP62Q8NB50 900 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-224ENST00000544990 C17orf47Q8NEP4 570 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 C16orf52Q8NHV5 167 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 CDC26Q8NHZ8 85 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 EXOSC8Q96B26 276 aaKnown RBP6.8□□□□□ -1.32
CPSF7-224ENST00000544990 SPACA9Q96E40 222 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-224ENST00000544990 C11orf24Q96F05 449 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-224ENST00000544990 CNRIP1Q96F85 164 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-224ENST00000544990 ZIM3Q96PE6 472 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 BBS4Q96RK4 519 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 MECRQ9BV79 373 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 EBPLQ9BY08 206 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 WWTR1Q9GZV5 400 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 LRTM1Q9HBL6 345 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 KCNK9Q9NPC2 374 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 MIEF1Q9NQG6 463 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 SLC35C2Q9NQQ7 365 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 C1orf109Q9NX04 203 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 MAT2BQ9NZL9 334 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 CNIH4Q9P003 139 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 HEY2Q9UBP5 337 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 PRODH2Q9UF12 536 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 BCAP29Q9UHQ4 241 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 NPIPA1Q9UND3 350 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 TRAF6Q9Y4K3 522 aa6.8□□□□□ -1.32
CPSF7-224ENST00000544990 POLR3HQ9Y535 204 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-224ENST00000544990 TRGV8A0A0C4DH27 118 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 NPIPB8E9PQR5 432 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 TP53I11O14683 189 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 BIRC5O15392 142 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 LRRTM2O43300 516 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 SNUPNO95149 360 aaKnown RBP6.79□□□□□ -1.32
CPSF7-224ENST00000544990 ZWINTO95229 277 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 NADKO95544 446 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-224ENST00000544990 CHRNGP07510 517 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 LINC00032P0C843 101 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 DDX5P17844 614 aaKnown RBP6.79□□□□□ -1.32
CPSF7-224ENST00000544990 DDCP20711 480 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 CD247P20963 164 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 S1PR1P21453 382 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 ETV4P43268 484 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 DCAF7P61962 342 aa6.79□□□□□ -1.32
CPSF7-224ENST00000544990 RPP38P78345 283 aaKnown RBP6.79□□□□□ -1.32
CPSF7-224ENST00000544990 CEBPEQ15744 281 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms