RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 ENPP6Q6UWR7 440 aa11.62□□□□□ -0.55
USP28-212ENST00000544750 MRRFQ96E11 262 aaKnown RBP11.62□□□□□ -0.55
USP28-212ENST00000544750 TXLNGYQ9BZA5 131 aa11.62□□□□□ -0.55
USP28-212ENST00000544750 TSPYL1Q9H0U9 437 aa11.62□□□□□ -0.55
USP28-212ENST00000544750 NXF5Q9H1B4 397 aaKnown RBP11.62□□□□□ -0.55
USP28-212ENST00000544750 DDX31Q9H8H2 851 aaKnown RBP11.62□□□□□ -0.55
USP28-212ENST00000544750 GALNT9Q9HCQ5 603 aa11.62□□□□□ -0.55
USP28-212ENST00000544750 SERHLQ9NQF3 203 aa11.62□□□□□ -0.55
USP28-212ENST00000544750 ZNF701Q9NV72 531 aaPredicted RBP11.62□□□□□ -0.55
USP28-212ENST00000544750 LYARQ9NX58 379 aaKnown RBP11.62□□□□□ -0.55
USP28-212ENST00000544750 ZNF226Q9NYT6 803 aa11.62□□□□□ -0.55
USP28-212ENST00000544750 ADGRE2Q9UHX3 823 aa11.62□□□□□ -0.55
USP28-212ENST00000544750 ANK2Q01484 3957 aa11.62□□□□□ -0.55
USP28-212ENST00000544750 C2orf72A6NCS6 295 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 LRRC14BA6NHZ5 514 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 PGRMC2O15173 223 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 CBR3O75828 277 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 CGAP01215 116 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 ALDOAP04075 364 aaKnown RBP11.61□□□□□ -0.55
USP28-212ENST00000544750 FAM153BP0C7A2 387 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 NR2F6P10588 404 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 ZNF708P17019 499 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 PHBP35232 272 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 UGT2B10P36537 528 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 ATP6V0D1P61421 351 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 IRF9Q00978 393 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 SNTA1Q13424 505 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 FAM153CQ494X1 144 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 MROH9Q5TGP6 573 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 HLA-DQA1Q5Y7H0 255 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 SCIMPQ6UWF3 145 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 NUP54Q7Z3B4 507 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 GALNT12Q8IXK2 581 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 IFT20Q8IY31 132 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 GSPT2Q8IYD1 628 aaKnown RBP11.61□□□□□ -0.55
USP28-212ENST00000544750 CENPLQ8N0S6 344 aaPredicted RBP11.61□□□□□ -0.55
USP28-212ENST00000544750 UBTD2Q8WUN7 234 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 OSBPL11Q9BXB4 747 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 METTL7AQ9H8H3 244 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 CD274Q9NZQ7 290 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 RNF112Q9ULX5 631 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 DLGAP4Q9Y2H0 992 aa11.61□□□□□ -0.55
USP28-212ENST00000544750 RNF212BA8MTL3 300 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 B4DXG7 233 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 FAM58BPP0C7Q3 252 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 NID1P14543 1247 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 GCAP28676 217 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 CRABP2P29373 138 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 GCKP35557 465 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 MAGEA12P43365 314 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 KIR2DL2P43627 348 aaPredicted RBP11.6□□□□□ -0.55
USP28-212ENST00000544750 RAP1GDS1P52306 607 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 RPS13P62277 151 aaKnown RBP11.6□□□□□ -0.55
USP28-212ENST00000544750 MGAT2Q10469 447 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 DDX39BQ13838 428 aaKnown RBP11.6□□□□□ -0.55
USP28-212ENST00000544750 OR52E8Q6IFG1 317 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 HEPHL1Q6MZM0 1159 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 BTLAQ7Z6A9 289 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 ISCA2Q86U28 154 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 IFNEQ86WN2 208 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 GRAMD2AQ8IUY3 354 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 MEIOBQ8N635 442 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 OR7G1Q8NGA0 311 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 OR14L1PQ8NHC6 308 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 UHMK1Q8TAS1 419 aaKnown RBP11.6□□□□□ -0.55
USP28-212ENST00000544750 DCAKDQ8WVC6 231 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 ATOH8Q96SQ7 321 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 PAFAH2Q99487 392 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 MTERF1Q99551 399 aaKnown RBP11.6□□□□□ -0.55
USP28-212ENST00000544750 MED18Q9BUE0 208 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 ACTR8Q9H981 624 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 HEY2Q9UBP5 337 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 MAPRE3Q9UPY8 281 aa11.6□□□□□ -0.55
USP28-212ENST00000544750 MRPS18CQ9Y3D5 142 aaKnown RBP11.6□□□□□ -0.55
USP28-212ENST00000544750 K7EPI3 171 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 ZNF500O60304 480 aaPredicted RBP11.59□□□□□ -0.55
USP28-212ENST00000544750 UGT2B11O75310 529 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 C2P06681 752 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 ABHD2P08910 425 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 SRD5A2P31213 254 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 CLDN15P56746 228 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 TNK1Q13470 666 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 CUL3Q13618 768 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 UAP1Q16222 522 aaPredicted RBP11.59□□□□□ -0.55
USP28-212ENST00000544750 PLEKHM3Q6ZWE6 761 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 RAPH1Q70E73 1250 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 ZNF550Q7Z398 422 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 RDH11Q8TC12 318 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 KCTD4Q8WVF5 259 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 NXNL1Q96CM4 212 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 OMA1Q96E52 524 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 PGM2Q96G03 612 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 GPR78Q96P69 363 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 FAM111AQ96PZ2 611 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 CENPKQ9BS16 269 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 OPN3Q9H1Y3 402 aaPredicted RBP11.59□□□□□ -0.55
USP28-212ENST00000544750 ALG9Q9H6U8 611 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 PSD3Q9NYI0 1048 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 ELOVL5Q9NYP7 299 aa11.59□□□□□ -0.55
USP28-212ENST00000544750 ZNF639Q9UID6 485 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms