RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 GAL3ST3Q96A11 431 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 RSPRY1Q96DX4 576 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 RNFT2Q96EX2 444 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 LGR4Q9BXB1 951 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 C1QTNF2Q9BXJ5 285 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 MCOLN1Q9GZU1 580 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 SAP130Q9H0E3 1048 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 RNF167Q9H6Y7 350 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 QPCTLQ9NXS2 382 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 TAS2R16Q9NYV7 291 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 NTMQ9P121 344 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 CLEC2DQ9UHP7 191 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 KLF15Q9UIH9 416 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 FBXL21Q9UKT6 434 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 FBXW2Q9UKT8 454 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 SPIN1Q9Y657 262 aaPredicted RBP12.26□□□□□ -0.45
CPSF7-223ENST00000544669 FABP12A6NFH5 140 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 FAM170BA6NMN3 283 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 M0R3H8 397 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 PROM1O43490 865 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 PRICKLE3O43900 615 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-223ENST00000544669 HCN1O60741 890 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 UBXN7O94888 489 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 CDRT1O95170 752 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 CHRM4P08173 479 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 F3P13726 295 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 PSMB5P28074 263 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 DRD3P35462 400 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 BCL6P41182 706 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 ASAH1Q13510 395 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 SOWAHCQ53LP3 525 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-223ENST00000544669 LIPKQ5VXJ0 399 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 ZNF776Q68DI1 518 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-223ENST00000544669 WASH2PQ6VEQ5 465 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 RBM45Q8IUH3 476 aaKnown RBP12.25□□□□□ -0.45
CPSF7-223ENST00000544669 GID4Q8IVV7 300 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 PEX5LQ8IYB4 626 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 UBQLNLQ8IYU4 475 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 RNF113BQ8IZP6 322 aaKnown RBP12.25□□□□□ -0.45
CPSF7-223ENST00000544669 CLIP4Q8N3C7 705 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 HDDC3Q8N4P3 179 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 OR5D16Q8NGK9 328 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 OR52N1Q8NH53 320 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 ACOT12Q8WYK0 555 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 ELP4Q96EB1 424 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 C1GALT1C1Q96EU7 318 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 OR2A14Q96R47 310 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 OR7D2Q96RA2 312 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 SNX18Q96RF0 628 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 MAN2C1Q9NTJ4 1040 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 DZANK1Q9NVP4 752 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 ASB6Q9NWX5 421 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 CES1P1Q9UKY3 287 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 SLC6A14Q9UN76 642 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 POLHQ9Y253 713 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 PCDHGA4Q9Y5G9 962 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 STON1Q9Y6Q2 735 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 NUP210Q8TEM1 1887 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-223ENST00000544669 MYOFQ9NZM1 2061 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 NUP214P35658 2090 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-223ENST00000544669 A0A087WUU8 490 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 A0A1W2PR48 441 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 PRAMEF27A3QJZ7 478 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 LINC01553A4QN01 128 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 FAM172BPA6NC97 362 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 FAM227AF5H4B4 570 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 DNTTP04053 509 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 CD53P19397 219 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 FEN1P39748 380 aaKnown RBP12.25□□□□□ -0.45
CPSF7-223ENST00000544669 MAN2A2P49641 1150 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 IRF4Q15306 451 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 FAM214AQ32MH5 1076 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 LRIT3Q3SXY7 679 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 ATAT1Q5SQI0 421 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 RSBN1Q5VWQ0 802 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-223ENST00000544669 CD200R1LQ6Q8B3 271 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 FAM131AQ6UXB0 335 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 ZNF517Q6ZMY9 492 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-223ENST00000544669 CCDC116Q8IYX3 515 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 SLC43A2Q8N370 569 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 KLHL36Q8N4N3 616 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 POGLUT1Q8NBL1 392 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 TP53I13Q8NBR0 393 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-223ENST00000544669 OR52E1Q8NGJ3 308 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 NT5CQ8TCD5 201 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 ASB15Q8WXK1 588 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 FGF13Q92913 245 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 FGF11Q92914 225 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 MS4A4EQ96PG1 132 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 ARHGAP9Q9BRR9 750 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 SRRQ9GZT4 340 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 HOXD1Q9GZZ0 328 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 IL20Q9NYY1 176 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 C5AR2Q9P296 337 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 PTGFRNQ9P2B2 879 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 SCML1Q9UN30 329 aa12.25□□□□□ -0.45
CPSF7-223ENST00000544669 DENND4AQ7Z401 1863 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 CCDC182A6NF36 153 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 MID1O15344 667 aa12.24□□□□□ -0.45
CPSF7-223ENST00000544669 COQ9O75208 318 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms