RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 NPIPA3F8WFD2 350 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 PLOD2O00469 737 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 ADAM10O14672 748 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 LSM1O15116 133 aaKnown RBP21.33■■□□□ 1.01
CHFR-222ENST00000544093 LINC00032P0C843 101 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 COL8A1P27658 744 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 CASP3P42574 277 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 ETV4P43268 484 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 ASMTP46597 345 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 SH2D4BQ5SQS7 431 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 SLC30A6Q6NXT4 461 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 PRR22Q8IZ63 422 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 VSTM2LQ96N03 204 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 TUBB1Q9H4B7 451 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 METTL7AQ9H8H3 244 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 PCDHGB3Q9Y5G1 929 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 PTGDR2Q9Y5Y4 395 aa21.33■■□□□ 1.01
CHFR-222ENST00000544093 TMEM114B3SHH9 223 aa21.32■■□□□ 1
CHFR-222ENST00000544093 TM9SF1O15321 606 aa21.32■■□□□ 1
CHFR-222ENST00000544093 ZNHIT1O43257 154 aa21.32■■□□□ 1
CHFR-222ENST00000544093 ERN1O75460 977 aaKnown RBP21.32■■□□□ 1
CHFR-222ENST00000544093 SNUPNO95149 360 aaKnown RBP21.32■■□□□ 1
CHFR-222ENST00000544093 CLDN14O95500 239 aa21.32■■□□□ 1
CHFR-222ENST00000544093 JUNP05412 331 aaKnown RBP21.32■■□□□ 1
CHFR-222ENST00000544093 MYZAPP0CAP1 466 aa21.32■■□□□ 1
CHFR-222ENST00000544093 CREB1P16220 341 aa21.32■■□□□ 1
CHFR-222ENST00000544093 MAPK1P28482 360 aa21.32■■□□□ 1
CHFR-222ENST00000544093 KRT20P35900 424 aa21.32■■□□□ 1
CHFR-222ENST00000544093 RPL38P63173 70 aaKnown RBP21.32■■□□□ 1
CHFR-222ENST00000544093 MRPS22P82650 360 aaKnown RBP21.32■■□□□ 1
CHFR-222ENST00000544093 ZNF630Q2M218 657 aaPredicted RBP21.32■■□□□ 1
CHFR-222ENST00000544093 UGT3A2Q3SY77 523 aa21.32■■□□□ 1
CHFR-222ENST00000544093 GXYLT1Q4G148 440 aa21.32■■□□□ 1
CHFR-222ENST00000544093 ACAD11Q709F0 780 aa21.32■■□□□ 1
CHFR-222ENST00000544093 LIX1Q8N485 282 aa21.32■■□□□ 1
CHFR-222ENST00000544093 SIMC1Q8NDZ2 872 aa21.32■■□□□ 1
CHFR-222ENST00000544093 OR7G2Q8NG99 324 aa21.32■■□□□ 1
CHFR-222ENST00000544093 OR2T11Q8NH01 316 aa21.32■■□□□ 1
CHFR-222ENST00000544093 PPP1R14CQ8TAE6 165 aa21.32■■□□□ 1
CHFR-222ENST00000544093 HGDQ93099 445 aa21.32■■□□□ 1
CHFR-222ENST00000544093 TMCO6Q96DC7 493 aa21.32■■□□□ 1
CHFR-222ENST00000544093 DTNBP1Q96EV8 351 aa21.32■■□□□ 1
CHFR-222ENST00000544093 PPP3R2Q96LZ3 170 aa21.32■■□□□ 1
CHFR-222ENST00000544093 COL21A1Q96P44 957 aa21.32■■□□□ 1
CHFR-222ENST00000544093 ACAD8Q9UKU7 415 aa21.32■■□□□ 1
CHFR-222ENST00000544093 LIPGQ9Y5X9 500 aa21.32■■□□□ 1
CHFR-222ENST00000544093 ACTL7BQ9Y614 415 aa21.32■■□□□ 1
CHFR-222ENST00000544093 PHF3Q92576 2039 aaKnown RBP21.31■■□□□ 1
CHFR-222ENST00000544093 BIRC5O15392 142 aa21.31■■□□□ 1
CHFR-222ENST00000544093 HNRNPRO43390 633 aaKnown RBP21.31■■□□□ 1
CHFR-222ENST00000544093 TBX19O60806 448 aa21.31■■□□□ 1
CHFR-222ENST00000544093 WDR1O75083 606 aa21.31■■□□□ 1
CHFR-222ENST00000544093 HOXD4P09016 255 aaPredicted RBP21.31■■□□□ 1
CHFR-222ENST00000544093 CELA3AP09093 270 aa21.31■■□□□ 1
CHFR-222ENST00000544093 RFPL3SP0C7P2 107 aa21.31■■□□□ 1
CHFR-222ENST00000544093 GDF1P27539 372 aa21.31■■□□□ 1
CHFR-222ENST00000544093 HTR1EP28566 365 aa21.31■■□□□ 1
CHFR-222ENST00000544093 SERPINB4P48594 390 aa21.31■■□□□ 1
CHFR-222ENST00000544093 EFR3AQ14156 821 aa21.31■■□□□ 1
CHFR-222ENST00000544093 RFTN2Q52LD8 501 aaPredicted RBP21.31■■□□□ 1
CHFR-222ENST00000544093 CEP85LQ5SZL2 805 aa21.31■■□□□ 1
CHFR-222ENST00000544093 WLSQ5T9L3 541 aa21.31■■□□□ 1
CHFR-222ENST00000544093 C3P1Q6ZMU1 363 aa21.31■■□□□ 1
CHFR-222ENST00000544093 ZCCHC23Q6ZST2 131 aa21.31■■□□□ 1
CHFR-222ENST00000544093 NUDCD3Q8IVD9 361 aa21.31■■□□□ 1
CHFR-222ENST00000544093 OR6Y1Q8NGX8 325 aa21.31■■□□□ 1
CHFR-222ENST00000544093 ZFP28Q8NHY6 868 aa21.31■■□□□ 1
CHFR-222ENST00000544093 NEIL3Q8TAT5 605 aa21.31■■□□□ 1
CHFR-222ENST00000544093 MTERF3Q96E29 417 aa21.31■■□□□ 1
CHFR-222ENST00000544093 SLC35A4Q96G79 324 aa21.31■■□□□ 1
CHFR-222ENST00000544093 AMDHD1Q96NU7 426 aa21.31■■□□□ 1
CHFR-222ENST00000544093 REEP4Q9H6H4 257 aa21.31■■□□□ 1
CHFR-222ENST00000544093 FOLH1BQ9HBA9 442 aa21.31■■□□□ 1
CHFR-222ENST00000544093 DDX18Q9NVP1 670 aaKnown RBP21.31■■□□□ 1
CHFR-222ENST00000544093 C19orf53Q9UNZ5 99 aaPredicted RBP21.31■■□□□ 1
CHFR-222ENST00000544093 EXO1Q9UQ84 846 aaKnown RBP21.31■■□□□ 1
CHFR-222ENST00000544093 NBPF19A0A087WUL8 3843 aa21.3■■□□□ 1
CHFR-222ENST00000544093 NOTCH2Q04721 2471 aa21.3■■□□□ 1
CHFR-222ENST00000544093 PIP5K1BO14986 540 aa21.3■■□□□ 1
CHFR-222ENST00000544093 LRATO95237 230 aa21.3■■□□□ 1
CHFR-222ENST00000544093 CT45A8P0DMV1 189 aa21.3■■□□□ 1
CHFR-222ENST00000544093 CT45A9P0DMV2 189 aa21.3■■□□□ 1
CHFR-222ENST00000544093 SDC1P18827 310 aa21.3■■□□□ 1
CHFR-222ENST00000544093 TACR1P25103 407 aa21.3■■□□□ 1
CHFR-222ENST00000544093 ACVR2AP27037 513 aa21.3■■□□□ 1
CHFR-222ENST00000544093 RPL3P39023 403 aaKnown RBP21.3■■□□□ 1
CHFR-222ENST00000544093 GALNTL6Q49A17 601 aa21.3■■□□□ 1
CHFR-222ENST00000544093 CT45A2Q5DJT8 189 aa21.3■■□□□ 1
CHFR-222ENST00000544093 EMC4Q5J8M3 183 aa21.3■■□□□ 1
CHFR-222ENST00000544093 SP5Q6BEB4 398 aaPredicted RBP21.3■■□□□ 1
CHFR-222ENST00000544093 ZNF787Q6DD87 383 aa21.3■■□□□ 1
CHFR-222ENST00000544093 LRIG3Q6UXM1 1119 aa21.3■■□□□ 1
CHFR-222ENST00000544093 R3HCC1LQ7Z5L2 792 aaKnown RBP21.3■■□□□ 1
CHFR-222ENST00000544093 KIRREL3Q8IZU9 778 aa21.3■■□□□ 1
CHFR-222ENST00000544093 OR2L13Q8N349 312 aa21.3■■□□□ 1
CHFR-222ENST00000544093 CA5BP1Q8WTZ4 195 aa21.3■■□□□ 1
CHFR-222ENST00000544093 ASB5Q8WWX0 329 aa21.3■■□□□ 1
CHFR-222ENST00000544093 RND1Q92730 232 aa21.3■■□□□ 1
CHFR-222ENST00000544093 TMBIM1Q969X1 311 aa21.3■■□□□ 1
CHFR-222ENST00000544093 PPCDCQ96CD2 204 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms