RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 LRIT3Q3SXY7 679 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 SLC35A4Q96G79 324 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 ACOT13Q9NPJ3 140 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 ENPP5Q9UJA9 477 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 CLCA2Q9UQC9 943 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 DSPPQ9NZW4 1301 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 TDRD6O60522 2096 aaKnown RBP15.99■□□□□ 0.15
PTPRO-209ENST00000543886 ST6GAL1P15907 406 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 CD38P28907 300 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 MAZP56270 477 aaKnown RBP15.99■□□□□ 0.15
PTPRO-209ENST00000543886 LEXMQ3ZCV2 418 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 TMEM236Q5W0B7 351 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 PGBD2Q6P3X8 592 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 KLHL35Q6PF15 583 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 DHRS4L2Q6PKH6 230 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 ANKRD13BQ86YJ7 626 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 CROCCP3Q8IVE0 287 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 NLGN4XQ8N0W4 816 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 LINC00471Q8N535 108 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 AVL9Q8NBF6 648 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 SLC7A13Q8TCU3 470 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 SLC9A6Q92581 669 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 CDS1Q92903 461 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 FUZQ9BT04 418 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 STARD5Q9NSY2 213 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 DOLKQ9UPQ8 538 aa15.99■□□□□ 0.15
PTPRO-209ENST00000543886 TRIOO75962 3097 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 CLCA1A8K7I4 914 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 TPST2O60704 377 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 LDB3O75112 727 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 GABRB1P18505 474 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 ST13P50502 369 aaKnown RBP15.98■□□□□ 0.15
PTPRO-209ENST00000543886 TARDBPQ13148 414 aaKnown RBP eCLIP15.98■□□□□ 0.15
PTPRO-209ENST00000543886 SYT6Q5T7P8 510 aaPredicted RBP15.98■□□□□ 0.15
PTPRO-209ENST00000543886 HEPHL1Q6MZM0 1159 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 PODNL1Q6PEZ8 512 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 VRK2Q86Y07 508 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 C19orf47Q8N9M1 422 aaKnown RBP15.98■□□□□ 0.15
PTPRO-209ENST00000543886 SLC16A11Q8NCK7 471 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 OR5T3Q8NGG3 340 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 FKBP10Q96AY3 582 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 POLR2J3Q9H1A7 115 aaKnown RBP15.98■□□□□ 0.15
PTPRO-209ENST00000543886 METTL12A8MUP2 240 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 M0R129 80 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 UBXN7O94888 489 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 ZBTB11O95625 1053 aaPredicted RBP15.98■□□□□ 0.15
PTPRO-209ENST00000543886 BCL10O95999 233 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 CSF2P04141 144 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 WNT1P04628 370 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 NME1P15531 152 aaKnown RBP15.98■□□□□ 0.15
PTPRO-209ENST00000543886 CNR2P34972 360 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 PDX1P52945 283 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 NUDT6P53370 316 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 EMP3P54852 163 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 DEFB110Q30KQ9 67 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 ZNF628Q5EBL2 1059 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 SLC16A12Q6ZSM3 486 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 PTCHD4Q6ZW05 846 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 GKN2Q86XP6 184 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 CA13Q8N1Q1 262 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 NR4A3Q92570 626 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 FCGR1BQ92637 280 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 TANKQ92844 425 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 SIGLEC11Q96RL6 698 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 FAM60AQ9NP50 221 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 AMBNQ9NP70 447 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 C11orf16Q9NQ32 467 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 KLHL28Q9NXS3 571 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 REV1Q9UBZ9 1251 aa15.98■□□□□ 0.15
PTPRO-209ENST00000543886 FAM170BA6NMN3 283 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 H3BN98 237 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 CYR61O00622 381 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 FGF17O60258 216 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 SLITRK5O94991 958 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 SOX14O95416 240 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 GPR75O95800 540 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 ATP1B1P05026 303 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 ZNF182P17025 639 aaPredicted RBP15.97■□□□□ 0.15
PTPRO-209ENST00000543886 NT5EP21589 574 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 PRKAR1BP31321 381 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 TAS2R41P59536 307 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 ILKQ13418 452 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 GJD3Q8N144 294 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 OR52P1PQ8NH57 321 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 LMX1AQ8TE12 382 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 GGHQ92820 318 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 ARHGDIGQ99819 225 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 ANKHQ9HCJ1 492 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 CTPS2Q9NRF8 586 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 CLN6Q9NWW5 311 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 C19orf53Q9UNZ5 99 aaPredicted RBP15.97■□□□□ 0.15
PTPRO-209ENST00000543886 TRIOBPQ9H2D6 2365 aa15.97■□□□□ 0.15
PTPRO-209ENST00000543886 hCG_2014768A0A024R1R8 64 aa15.96■□□□□ 0.15
PTPRO-209ENST00000543886 SGK494L7N484 410 aa15.96■□□□□ 0.15
PTPRO-209ENST00000543886 CDK1P06493 297 aa15.96■□□□□ 0.15
PTPRO-209ENST00000543886 NDUFA9Q16795 377 aa15.96■□□□□ 0.15
PTPRO-209ENST00000543886 TRMT12Q53H54 448 aaKnown RBP15.96■□□□□ 0.15
PTPRO-209ENST00000543886 TMEM52Q8NDY8 209 aa15.96■□□□□ 0.15
PTPRO-209ENST00000543886 OR4K5Q8NGD3 323 aa15.96■□□□□ 0.15
PTPRO-209ENST00000543886 BCL7BQ9BQE9 202 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms