RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 OR56A3Q8NH54 315 aa7.77□□□□□ -1.17
PRKAB1-207ENST00000542698 RPLP0P6Q8NHW5 317 aa7.77□□□□□ -1.17
PRKAB1-207ENST00000542698 YIPF6Q96EC8 236 aa7.77□□□□□ -1.17
PRKAB1-207ENST00000542698 DTD2Q96FN9 168 aa7.77□□□□□ -1.17
PRKAB1-207ENST00000542698 GINS4Q9BRT9 223 aa7.77□□□□□ -1.17
PRKAB1-207ENST00000542698 COMMD4Q9H0A8 199 aa7.77□□□□□ -1.17
PRKAB1-207ENST00000542698 GABARAPL1Q9H0R8 117 aa7.77□□□□□ -1.17
PRKAB1-207ENST00000542698 RNF167Q9H6Y7 350 aa7.77□□□□□ -1.17
PRKAB1-207ENST00000542698 RANBP3Q9H6Z4 567 aaPredicted RBP7.77□□□□□ -1.17
PRKAB1-207ENST00000542698 CKLFQ9UBR5 152 aa7.77□□□□□ -1.17
PRKAB1-207ENST00000542698 UGT2A1Q9Y4X1 527 aa7.77□□□□□ -1.17
PRKAB1-207ENST00000542698 CSNK1G3Q9Y6M4 447 aa7.77□□□□□ -1.17
PRKAB1-207ENST00000542698 COL4A5P29400 1685 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 SLC22A31A6NKX4 558 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 C12orf71A8MTZ7 269 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 LRRN3E7EW58 273 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 PRSS23O95084 383 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 CTSAP10619 480 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 ADRB3P13945 408 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 CSF2RAP15509 400 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 NPPBP16860 134 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 DEFB134Q4QY38 66 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 CD300LGQ6UXG3 332 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 CALHM3Q86XJ0 350 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 MSRB3Q8IXL7 192 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 ZNF676Q8N7Q3 588 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 FANK1Q8TC84 345 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 TSEN15Q8WW01 171 aaKnown RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 DEDD2Q8WXF8 326 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 SNX18Q96RF0 628 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 TTTY10Q9BZA0 68 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 LRRN3Q9H3W5 708 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 TLR9Q9NR96 1032 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 C14orf105Q9NVL8 296 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 HCFC1R1Q9NWW0 138 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 RDH8Q9NYR8 311 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 A0A075B6Q4 140 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 TRBV5-4A0A0C4DH59 114 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 FAM227AF5H4B4 570 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 UPK1AO00322 258 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 ABLIM3O94929 683 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 RPP14O95059 124 aaKnown RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 SLC6A6P31641 620 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 MAN2A2P49641 1150 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 SEC13P55735 322 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 RPL6Q02878 288 aaKnown RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 SF3B4Q15427 424 aaKnown RBP eCLIP7.76□□□□□ -1.176e-9■■■■■ 41.8
PRKAB1-207ENST00000542698 ZNF852Q6ZMS4 543 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 ARMCX6Q7L4S7 300 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 PTOV1Q86YD1 416 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 MS4A15Q8N5U1 240 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 Q8N9G6 341 aaPredicted RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 HERVK_113Q902F9 699 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 AHCYL2Q96HN2 611 aaKnown RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 PRRC1Q96M27 445 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 ZSWIM3Q96MP5 696 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 LYSMD1Q96S90 227 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 SLA2Q9H6Q3 261 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 MTHFD2LQ9H903 347 aaPredicted RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 PELI2Q9HAT8 420 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 ZDHHC4Q9NPG8 344 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 THSD1Q9NS62 852 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 ACER3Q9NUN7 267 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 SPATA6Q9NWH7 488 aaPredicted RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 LYARQ9NX58 379 aaKnown RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 TAS2R10Q9NYW0 307 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 TSPAN4O14817 238 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 CASC3O15234 703 aaKnown RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 GNSP15586 552 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 RPS19P39019 145 aaKnown RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 PGDP52209 483 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 YBX1P67809 324 aaKnown RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 NTHL1P78549 312 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 TIAL1Q01085 375 aaKnown RBP eCLIP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 ARHGAP19Q14CB8 494 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 KIAA0040Q15053 153 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 TRAM1Q15629 374 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 TATDN3Q17R31 274 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 PARS2Q7L3T8 475 aaKnown RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 TAF8Q7Z7C8 310 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 SYT14Q8NB59 555 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 JPH3Q8WXH2 748 aaPredicted RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 COQ8BQ96D53 544 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 S100A16Q96FQ6 103 aaKnown RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 CXorf36Q9H7Y0 433 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 GNG8Q9UK08 70 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 MRTO4Q9UKD2 239 aaKnown RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 NEU3Q9UQ49 428 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 SNX11Q9Y5W9 270 aa7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 TRIP12Q14669 1992 aaPredicted RBP7.76□□□□□ -1.17
PRKAB1-207ENST00000542698 A0A1W2PRG6 482 aa7.75□□□□□ -1.17
PRKAB1-207ENST00000542698 A0A1W2PRQ8 180 aa7.75□□□□□ -1.17
PRKAB1-207ENST00000542698 ZNF860A6NHJ4 632 aa7.75□□□□□ -1.17
PRKAB1-207ENST00000542698 UNC119BA6NIH7 251 aa7.75□□□□□ -1.17
PRKAB1-207ENST00000542698 MCIDASD6RGH6 385 aa7.75□□□□□ -1.17
PRKAB1-207ENST00000542698 ZNF670-ZNF695F2Z2N8 137 aa7.75□□□□□ -1.17
PRKAB1-207ENST00000542698 H3BNC9 293 aa7.75□□□□□ -1.17
PRKAB1-207ENST00000542698 CD2P06729 351 aa7.75□□□□□ -1.17
PRKAB1-207ENST00000542698 DNASE1P24855 282 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms