RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 TEKT2Q9UIF3 430 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 GPR55Q9Y2T6 319 aaPredicted RBP21.42■■□□□ 1.02
HOMER3-205ENST00000542541 PCDHGB3Q9Y5G1 929 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 KCNMB2Q9Y691 235 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 ACACBO00763 2458 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 LAMA5O15230 3695 aa21.42■■□□□ 1.02
HOMER3-205ENST00000542541 A8MUI8 341 aa21.41■■□□□ 1.02
HOMER3-205ENST00000542541 FXYD1O00168 92 aa21.41■■□□□ 1.02
HOMER3-205ENST00000542541 ATP5HO75947 161 aa21.41■■□□□ 1.02
HOMER3-205ENST00000542541 UNC5CO95185 931 aa21.41■■□□□ 1.02
HOMER3-205ENST00000542541 AGR2O95994 175 aa21.41■■□□□ 1.02
HOMER3-205ENST00000542541 ALOX5P09917 674 aa21.41■■□□□ 1.02
HOMER3-205ENST00000542541 FADDQ13158 208 aa21.41■■□□□ 1.02
HOMER3-205ENST00000542541 H3F3CQ6NXT2 135 aa21.41■■□□□ 1.02
HOMER3-205ENST00000542541 PNPT1Q8TCS8 783 aaKnown RBP21.41■■□□□ 1.02
HOMER3-205ENST00000542541 SNRNP27Q8WVK2 155 aaKnown RBP21.41■■□□□ 1.02
HOMER3-205ENST00000542541 APOBEC4Q8WW27 367 aaKnown RBP21.41■■□□□ 1.02
HOMER3-205ENST00000542541 SLC9A6Q92581 669 aa21.41■■□□□ 1.02
HOMER3-205ENST00000542541 HOXB13Q92826 284 aaPredicted RBP21.41■■□□□ 1.02
HOMER3-205ENST00000542541 ADIPOR1Q96A54 375 aa21.41■■□□□ 1.02
HOMER3-205ENST00000542541 LCORQ96JN0 433 aaPredicted RBP21.41■■□□□ 1.02
HOMER3-205ENST00000542541 BTBD9Q96Q07 612 aa21.41■■□□□ 1.02
HOMER3-205ENST00000542541 ITPAQ9BY32 194 aa21.41■■□□□ 1.02
HOMER3-205ENST00000542541 MYOTQ9UBF9 498 aa21.41■■□□□ 1.02
HOMER3-205ENST00000542541 DTX4Q9Y2E6 619 aa21.41■■□□□ 1.02
HOMER3-205ENST00000542541 CFAP47Q6ZTR5 3102 aa21.41■■□□□ 1.02
HOMER3-205ENST00000542541 HNRNPCL1O60812 293 aaKnown RBP21.4■■□□□ 1.02
HOMER3-205ENST00000542541 CRATP43155 626 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 KHKP50053 298 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 BNIP1Q12981 228 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 RGNQ15493 299 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 C16orf89Q6UX73 402 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 RPS19BP1Q86WX3 136 aaKnown RBP21.4■■□□□ 1.02
HOMER3-205ENST00000542541 SLC16A11Q8NCK7 471 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 THAP3Q8WTV1 239 aaPredicted RBP21.4■■□□□ 1.02
HOMER3-205ENST00000542541 STACQ99469 402 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 CPPED1Q9BRF8 314 aaPredicted RBP21.4■■□□□ 1.02
HOMER3-205ENST00000542541 SLC39A3Q9BRY0 314 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 YIPF4Q9BSR8 244 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 PIGUQ9H490 435 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 Q9N2J8 555 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 DUSP22Q9NRW4 184 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 THUMPD1Q9NXG2 353 aaKnown RBP21.4■■□□□ 1.02
HOMER3-205ENST00000542541 AP3M1Q9Y2T2 418 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 PCSK5Q92824 1860 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 FRG2CA6NGY1 282 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 ACOX3O15254 700 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 ASNA1O43681 348 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 PRKNO60260 465 aaPredicted RBP21.4■■□□□ 1.02
HOMER3-205ENST00000542541 NME6O75414 186 aaPredicted RBP21.4■■□□□ 1.02
HOMER3-205ENST00000542541 GPX2P18283 190 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 MAP3K8P41279 467 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 RPS26P62854 115 aaKnown RBP21.4■■□□□ 1.02
HOMER3-205ENST00000542541 PSG6Q00889 435 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.4■■□□□ 1.021e-8■■■■□ 19.6
HOMER3-205ENST00000542541 TCTN3Q6NUS6 607 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 CCDC121Q6ZUS5 278 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 TAGAPQ8N103 731 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 LGI4Q8N135 537 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 ARMC10Q8N2F6 343 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 BRIX1Q8TDN6 353 aaKnown RBP21.4■■□□□ 1.02
HOMER3-205ENST00000542541 GPR151Q8TDV0 419 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 HSPBAP1Q96EW2 488 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 ZNF354BQ96LW1 612 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 GPATCH1Q9BRR8 931 aaKnown RBP21.4■■□□□ 1.02
HOMER3-205ENST00000542541 OR51I1Q9H343 314 aa21.4■■□□□ 1.02
HOMER3-205ENST00000542541 ANKRD11Q6UB99 2663 aaPredicted RBP21.4■■□□□ 1.02
HOMER3-205ENST00000542541 TPRP12270 2363 aaKnown RBP21.39■■□□□ 1.02
HOMER3-205ENST00000542541 MAP1BP46821 2468 aaKnown RBP21.39■■□□□ 1.01
HOMER3-205ENST00000542541 NKX2-2O95096 273 aa21.39■■□□□ 1.01
HOMER3-205ENST00000542541 CT45A8P0DMV1 189 aa21.39■■□□□ 1.01
HOMER3-205ENST00000542541 CT45A9P0DMV2 189 aa21.39■■□□□ 1.01
HOMER3-205ENST00000542541 SLC6A2P23975 617 aa21.39■■□□□ 1.01
HOMER3-205ENST00000542541 GABRA3P34903 492 aa21.39■■□□□ 1.01
HOMER3-205ENST00000542541 RASSF2P50749 326 aa21.39■■□□□ 1.01
HOMER3-205ENST00000542541 CCL11P51671 97 aa21.39■■□□□ 1.01
HOMER3-205ENST00000542541 NR0B1P51843 470 aaKnown RBP21.39■■□□□ 1.01
HOMER3-205ENST00000542541 NRG3P56975 720 aa21.39■■□□□ 1.01
HOMER3-205ENST00000542541 CXADRP78310 365 aa21.39■■□□□ 1.01
HOMER3-205ENST00000542541 CT45A2Q5DJT8 189 aa21.39■■□□□ 1.01
HOMER3-205ENST00000542541 EXOSC6Q5RKV6 272 aaKnown RBP21.39■■□□□ 1.01
HOMER3-205ENST00000542541 SLC44A2Q8IWA5 706 aaPredicted RBP21.39■■□□□ 1.01
HOMER3-205ENST00000542541 ZNF441Q8N8Z8 693 aa21.39■■□□□ 1.01
HOMER3-205ENST00000542541 PSMF1Q92530 271 aa21.39■■□□□ 1.01
HOMER3-205ENST00000542541 C1orf21Q9H246 121 aa21.39■■□□□ 1.01
HOMER3-205ENST00000542541 L3MBTL1Q9Y468 752 aa21.39■■□□□ 1.01
HOMER3-205ENST00000542541 OR10H1Q9Y4A9 318 aa21.39■■□□□ 1.01
HOMER3-205ENST00000542541 ZZEF1O43149 2961 aa21.39■■□□□ 1.01
HOMER3-205ENST00000542541 MAN2A2P49641 1150 aa21.38■■□□□ 1.01
HOMER3-205ENST00000542541 MVDP53602 400 aa21.38■■□□□ 1.01
HOMER3-205ENST00000542541 CASP9P55211 416 aa21.38■■□□□ 1.01
HOMER3-205ENST00000542541 CORO7P57737 925 aa21.38■■□□□ 1.01
HOMER3-205ENST00000542541 MTPNP58546 118 aa21.38■■□□□ 1.01
HOMER3-205ENST00000542541 PSME3P61289 254 aa21.38■■□□□ 1.01
HOMER3-205ENST00000542541 MEP1AQ16819 746 aa21.38■■□□□ 1.01
HOMER3-205ENST00000542541 CYP27C1Q4G0S4 372 aa21.38■■□□□ 1.01
HOMER3-205ENST00000542541 CRB2Q5IJ48 1285 aa21.38■■□□□ 1.01
HOMER3-205ENST00000542541 ATAD3BQ5T9A4 648 aa21.38■■□□□ 1.01
HOMER3-205ENST00000542541 C8orf82Q6P1X6 216 aaPredicted RBP21.38■■□□□ 1.01
HOMER3-205ENST00000542541 TNFAIP8L2Q6P589 184 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms