RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 EDARADDQ8WWZ3 215 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 ARRDC3Q96B67 414 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 SGTBQ96EQ0 304 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 SGCZQ96LD1 299 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 COQ10AQ96MF6 247 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 RIOK2Q9BVS4 552 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 FAM83DQ9H4H8 585 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 SLC52A3Q9NQ40 469 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 EVA1BQ9NVM1 165 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 B3GNT2Q9NY97 397 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 CCDC59Q9P031 241 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 AKAP7Q9P0M2 348 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 MUTYHQ9UIF7 546 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 TMEM82A0PJX8 343 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 ZNF729A6NN14 1252 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 NDUFS8O00217 210 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 AKAP8O43823 692 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 MTX2O75431 263 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 WDR47O94967 919 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 LDOC1O95751 146 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 RPLP0P05388 317 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 MYL9P24844 172 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 MAPK3P27361 379 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 EPHA2P29317 976 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 MAT1AQ00266 395 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 EMX2Q04743 252 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 SCARB2Q14108 478 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 EIF4HQ15056 248 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 PDGFRLQ15198 375 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 IRF4Q15306 451 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 BAK1Q16611 211 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 ZNF658BQ4V348 819 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 ANKRD54Q6NXT1 300 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 ETV3LQ6ZN32 361 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 CYP4Z1Q86W10 505 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 KIF18BQ86Y91 864 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 SVOPLQ8N434 492 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 CDK15Q96Q40 435 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 GTPBP2Q9BX10 602 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 CTSFQ9UBX1 484 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 SLC23A1Q9UHI7 598 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 LRRK1Q38SD2 2015 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 XIRP2A4UGR9 3374 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 EDDM13A0A1B0GTR0 161 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 A0A1W2PQ09 198 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 MFSD2BA6NFX1 497 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 OR4F21O95013 312 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 MATN4O95460 622 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 FHP07954 510 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 PRPS2P11908 318 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 ITGB7P26010 798 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 TNFSF8P32971 234 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 KIR3DL2P43630 455 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 GTF2H2Q13888 395 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 ZNF234Q14588 700 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 ZNF169Q14929 603 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 RBBP7Q16576 425 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 ZBTB37Q5TC79 503 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 GTF2H2CQ6P1K8 395 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 MBOAT1Q6ZNC8 495 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 ZNF767PQ75MW2 155 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 C16orf62Q7Z3J2 963 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 FAM169BQ8N8A8 192 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 OR2T12Q8NG77 320 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 OR5K1Q8NHB7 308 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 OR10J5Q8NHC4 309 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 FAM216AQ8WUB2 273 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 MRPL38Q96DV4 380 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 KCNC2Q96PR1 638 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 TREM1Q9NP99 234 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 EXOSC4Q9NPD3 245 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 DEC1Q9P2X7 70 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 TMEFF2Q9UIK5 374 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 TNPO3Q9Y5L0 923 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 GPR45Q9Y5Y3 372 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 SZT2Q5T011 3432 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 MEX3AA1L020 520 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 MARCH11A6NNE9 402 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 EEDO75530 441 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 AP2A2O94973 939 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 DIRAS1O95057 198 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 OR56A5P0C7T3 313 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 ADORA3P0DMS8 318 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 ZNF8P17098 575 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 EPORP19235 508 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 MAT2AP31153 395 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 PCGF2P35227 344 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 NUP62P37198 522 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 HSPA7P48741 367 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 RPL6Q02878 288 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 MVKQ03426 396 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 RCAN2Q14206 197 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 ALG11Q2TAA5 492 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 TTLL9Q3SXZ7 439 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 RUNDC3AQ59EK9 446 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 ZNF648Q5T619 568 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 CDYL2Q8N8U2 506 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 SLC24A4Q8NFF2 622 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 OR4F6Q8NGB9 312 aa7.56□□□□□ -1.2
PDLIM5-221ENST00000542407 ASB11Q8WXH4 323 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms