RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	TRPS1	Q9UHF7	1281 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SLC23A1	Q9UHI7	598 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TRAPPC4	Q9Y296	219 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PPIL1	Q9Y3C6	166 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ALG5	Q9Y673	324 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783		A0A075B6Q4	140 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	C17orf113	A0A1B0GUU1	675 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	C2orf74	A8MZ97	194 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SLC16A5	O15375	505 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GAST	P01350	101 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	IGLV3-19	P01714	112 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	HBQ1	P09105	142 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	C1S	P09871	688 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PRPS2	P11908	318 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	RPS3	P23396	243 aa	Known RBP eCLIP	5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CDC42	P60953	191 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LARS2	Q15031	903 aa	Known RBP	5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	AMZ1	Q400G9	498 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PLET1	Q6UQ28	207 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LRRC69	Q6ZNQ3	347 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	EID2	Q8N6I1	236 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OR13H1	Q8NG92	308 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OR8H1	Q8NGG4	311 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SETD6	Q8TBK2	473 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TSACC	Q96A04	125 aa	Predicted RBP	5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PKP4	Q99569	1192 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GALNT9	Q9HCQ5	603 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MCUB	Q9NWR8	336 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CLN6	Q9NWW5	311 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MBD1	Q9UIS9	605 aa	Predicted RBP	5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OR1A2	Q9Y585	309 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TPR	P12270	2363 aa	Known RBP	5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LOC102723532	A0A0G2JNH3	316 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783		A8MUA0	341 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CS	O75390	466 aa	Known RBP	5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MPC1L	P0DKB6	136 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	UBL4A	P11441	157 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CHM	P24386	653 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PSMA1	P25786	263 aa	Known RBP	5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SDC2	P34741	201 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CRYBB2	P43320	205 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GZMK	P49863	264 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	POU6F2	P78424	691 aa	Predicted RBP	5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ACY1	Q03154	408 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	C1orf61	Q13536	156 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SPHAR	Q15513	63 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GPR19	Q15760	415 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MICA	Q29983	383 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SLC35F1	Q5T1Q4	408 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZFP41	Q8N8Y5	198 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NFKBID	Q8NI38	313 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZFAND1	Q8TCF1	268 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MTERF3	Q96E29	417 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	COQ10A	Q96MF6	247 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CD180	Q99467	661 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	AIF1L	Q9BQI0	150 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	C3orf14	Q9HBI5	128 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PDE7B	Q9NP56	450 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	UCKL1	Q9NWZ5	548 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MAP4K5	Q9Y4K4	846 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ALPK3	Q96L96	1907 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	BRWD1	Q9NSI6	2320 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GABRR3	A8MPY1	467 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783		H3BN98	237 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783		H7C0S8	307 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CDK2AP1	O14519	115 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	KLK3	P07288	261 aa	Predicted RBP	5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZNF806	P0C7X5	589 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZNF883	P0CG24	379 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NXPH1	P58417	271 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SELENOW	P63302	87 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	HHEX	Q03014	270 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LRRC74A	Q0VAA2	488 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CHIT1	Q13231	466 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	RGN	Q15493	299 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TCEA2	Q15560	299 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FLYWCH1	Q4VC44	716 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ATP13A5	Q4VNC0	1218 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ERICH5	Q6P6B1	374 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	RFLNA	Q6ZTI6	216 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GLRX5	Q86SX6	157 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	KRT73	Q86Y46	540 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	IQCF1	Q8N6M8	205 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LMNTD1	Q8N9Z9	388 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TTL	Q8NG68	377 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	DNASE2B	Q8WZ79	361 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TESC	Q96BS2	214 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CMTM7	Q96FZ5	175 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MED8	Q96G25	268 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZC3H10	Q96K80	434 aa	Known RBP	5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	DUSP26	Q9BV47	211 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TRIM45	Q9H8W5	580 aa	Predicted RBP	5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	IL26	Q9NPH9	171 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NDOR1	Q9UHB4	597 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SERTAD3	Q9UJW9	196 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SATB2	Q9UPW6	733 aa		5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MRPS33	Q9Y291	106 aa	Known RBP	5.35	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	POFUT2	Q9Y2G5	429 aa		5.35	□□□□□ -1.55

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