RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CENPNQ96H22 339 aaPredicted RBP13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 BTBD9Q96Q07 612 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 YIPF4Q9BSR8 244 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 TGIF2Q9GZN2 237 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 CCDC86Q9H6F5 360 aaKnown RBP13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 BCL2L10Q9HD36 194 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 EQTNQ9NQ60 294 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 NECTIN3Q9NQS3 549 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 LIPT1Q9Y234 373 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 SMG1Q96Q15 3661 aaKnown RBP13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 SEC16AO15027 2179 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 IGLV3-12A0A075B6K2 115 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 IGKV3D-11A0A0A0MRZ8 115 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 FAM149AA5PLN7 773 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 M0QX08 132 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 SLC28A2O43868 658 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 RFPL3O75679 317 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 PGM3O95394 542 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 TIAF1O95411 115 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 CBX7O95931 251 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 LDLRP01130 860 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 MAOAP21397 527 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 RORAP35398 523 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 CRISP3P54108 245 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 MC2RQ01718 297 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 FUT5Q11128 374 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 SYPL1Q16563 259 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 ATAD3BQ5T9A4 648 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 ZNF385CQ66K41 422 aaPredicted RBP13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 DGAT2L6Q6ZPD8 337 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 COX15Q7KZN9 410 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 AMIGO2Q86SJ2 522 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 CDRT4Q8N9R6 151 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 BBS10Q8TAM1 723 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 ADAMTS15Q8TE58 950 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 LZICQ8WZA0 190 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 HOXB13Q92826 284 aaPredicted RBP13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 RIT1Q92963 219 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 CLIP3Q96DZ5 547 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 HSH2DQ96JZ2 352 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 PTCHD1Q96NR3 888 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 DOHHQ9BU89 302 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 SEMA6AQ9H2E6 1030 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 APMAPQ9HDC9 416 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 FBXO8Q9NRD0 319 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 SLC22A11Q9NSA0 550 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 GIN1Q9NXP7 522 aa13.29□□□□□ -0.28
CYB561A3-216ENST00000540755 URB1O60287 2271 aaKnown RBP13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 TMEM229AB2RXF0 380 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 B4E171 279 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 TMX2-CTNND1H3BSU7 103 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 POLR1CO15160 346 aaPredicted RBP13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 DEAF1O75398 565 aaPredicted RBP13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 SOX30O94993 753 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 PRSS23O95084 383 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 NR2F1P10589 423 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 S1PR1P21453 382 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 TSPAN7P41732 249 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 RHAGQ02094 409 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 RPS26P11Q5JNZ5 115 aaPredicted RBP13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 HEPHL1Q6MZM0 1159 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 DHRS13Q6UX07 377 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 VTCN1Q7Z7D3 282 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 SLC44A2Q8IWA5 706 aaPredicted RBP13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 SLC38A9Q8NBW4 561 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 SIMC1Q8NDZ2 872 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 ZNF607Q96SK3 696 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 STACQ99469 402 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 TREX2Q9BQ50 279 aaPredicted RBP13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 BDH2Q9BUT1 245 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 BTBD2Q9BX70 525 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 PIGUQ9H490 435 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 ADAP2Q9NPF8 381 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 IL1RAPQ9NPH3 570 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 BATF3Q9NR55 127 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 EXD2Q9NVH0 621 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 C14orf105Q9NVL8 296 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 CALML5Q9NZT1 146 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 AKAP7Q9P0M2 348 aaPredicted RBP13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 DKK4Q9UBT3 224 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 PCDHGA1Q9Y5H4 931 aa13.28□□□□□ -0.28
CYB561A3-216ENST00000540755 CCDC88CQ9P219 2028 aa13.27□□□□□ -0.28
CYB561A3-216ENST00000540755 A0A0G2JPF8 293 aa13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 OR2W5A6NFC9 320 aa13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 HNRNPCL2B2RXH8 293 aa13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 HNRNPCL3B7ZW38 293 aa13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 CLOCKO15516 846 aa13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 CPNE3O75131 537 aaKnown RBP13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 MT-ND1P03886 318 aa13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 OPN1SWP03999 348 aa13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 HNRNPCL4P0DMR1 293 aa13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 ACP2P11117 423 aa13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 MAP3K8P41279 467 aa13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 CLDN6P56747 220 aa13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 KCNJ10P78508 379 aa13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 DCDP81605 110 aaKnown RBP13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 FUT7Q11130 342 aa13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 EXOSC7Q15024 291 aaKnown RBP13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 GRAMD1BQ3KR37 738 aa13.27□□□□□ -0.29
CYB561A3-216ENST00000540755 MINDY4Q4G0A6 757 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms