RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 PRTFDC1Q9NRG1 225 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 STX18Q9P2W9 335 aaKnown RBP9.88□□□□□ -0.83
ATL3-204ENST00000540699 C19orf25Q9UFG5 118 aaPredicted RBP9.88□□□□□ -0.83
ATL3-204ENST00000540699 MAGEL2Q9UJ55 1249 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 FBXL4Q9UKA2 621 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 PCDHGB4Q9UN71 923 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 CORO2BQ9UQ03 480 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 SPACA6W5XKT8 324 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 TNRC6AQ8NDV7 1962 aaKnown RBP9.88□□□□□ -0.83
ATL3-204ENST00000540699 RNF103-CHMP3A0A140T963 221 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 ELOVL7A1L3X0 281 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 H0Y3Z8 333 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 TGFBR3LH3BV60 316 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 PEX12O00623 359 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 CLDN4O14493 209 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 SLC28A2O43868 658 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 TNFRSF21O75509 655 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 CDC123O75794 336 aaPredicted RBP9.87□□□□□ -0.83
ATL3-204ENST00000540699 CEACAM4O75871 244 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 HPP00738 406 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 BMP2P12643 396 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 NCK1P16333 377 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 CSNK2A2P19784 350 aaPredicted RBP9.87□□□□□ -0.83
ATL3-204ENST00000540699 MAOAP21397 527 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 RRADP55042 308 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 MANFP55145 182 aaKnown RBP9.87□□□□□ -0.83
ATL3-204ENST00000540699 MRPS22P82650 360 aaKnown RBP9.87□□□□□ -0.83
ATL3-204ENST00000540699 FADDQ13158 208 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 PCOLCEQ15113 449 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 RGNQ15493 299 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 NSDHLQ15738 373 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 ADRM1Q16186 407 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 ZNF750Q32MQ0 723 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 CYP2R1Q6VVX0 501 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 TMEM64Q6YI46 380 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 RNF111Q6ZNA4 994 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 LANCL3Q6ZV70 420 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 NDUFAF7Q7L592 441 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 CPEB2Q7Z5Q1 589 aaKnown RBP9.87□□□□□ -0.83
ATL3-204ENST00000540699 SPATA24Q86W54 205 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 ZZZ3Q8IYH5 903 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 C7orf57Q8NEG2 295 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 ZFP28Q8NHY6 868 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 APOBEC4Q8WW27 367 aaKnown RBP9.87□□□□□ -0.83
ATL3-204ENST00000540699 METTL21AQ8WXB1 218 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 PYDC1Q8WXC3 89 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 TANKQ92844 425 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 EXTL1Q92935 676 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 ANKRD9Q96BM1 317 aaPredicted RBP9.87□□□□□ -0.83
ATL3-204ENST00000540699 C8orf44Q96CB5 159 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 NEURL3Q96EH8 262 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 FER1L6-AS2Q96M78 137 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 PTCHD1Q96NR3 888 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 TRIM15Q9C019 465 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 PIF1Q9H611 641 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 RPF2Q9H7B2 306 aaKnown RBP9.87□□□□□ -0.83
ATL3-204ENST00000540699 GORASP2Q9H8Y8 452 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 ENTPD4Q9Y227 616 aa9.87□□□□□ -0.83
ATL3-204ENST00000540699 RELNP78509 3460 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 ERAL1O75616 437 aaKnown RBP9.86□□□□□ -0.83
ATL3-204ENST00000540699 KRT75O95678 551 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 ANPEPP15144 967 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 PPP2R1BP30154 601 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 TLX1P31314 330 aaPredicted RBP9.86□□□□□ -0.83
ATL3-204ENST00000540699 SOAT1P35610 550 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 SOX18P35713 384 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 FEN1P39748 380 aaKnown RBP9.86□□□□□ -0.83
ATL3-204ENST00000540699 NCBP2P52298 156 aaKnown RBP eCLIP9.86□□□□□ -0.83
ATL3-204ENST00000540699 POLE2P56282 527 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 AP2B1P63010 937 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 Q0VFX4 171 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 NFATC3Q12968 1075 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 HSPB3Q12988 150 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 BIKQ13323 160 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 VMACQ2NL98 169 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 MTX3Q5HYI7 312 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 COX20Q5RI15 118 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.86□□□□□ -0.83
ATL3-204ENST00000540699 MFSD4BQ5TF39 518 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 FAAH2Q6GMR7 532 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 GLYATQ6IB77 296 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 ZFP1Q6P2D0 407 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 ERICH5Q6P6B1 374 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 PRICKLE2Q7Z3G6 844 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 PACS2Q86VP3 889 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 SPPL2CQ8IUH8 684 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 SAMD14Q8IZD0 417 aaPredicted RBP9.86□□□□□ -0.83
ATL3-204ENST00000540699 ADGRG5Q8IZF4 528 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 TNIP2Q8NFZ5 429 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 OR5AK3PQ8NH89 298 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 PNPT1Q8TCS8 783 aaKnown RBP9.86□□□□□ -0.83
ATL3-204ENST00000540699 SFXN5Q8TD22 340 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 SLCO4A1Q96BD0 722 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 BBS4Q96RK4 519 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 ARHGAP9Q9BRR9 750 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 ING2Q9H160 280 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 ADNPQ9H2P0 1102 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 RAD21L1Q9H4I0 556 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 GIMAP4Q9NUV9 329 aa9.86□□□□□ -0.83
ATL3-204ENST00000540699 TUBD1Q9UJT1 453 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms